From artificial antibodies to nanosprings: the biophysical properties of repeat proteins.

作者: Laura S. Itzhaki , Alan R. Lowe

DOI: 10.1007/978-1-4614-3229-6_10

关键词:

摘要: In this chapter we review recent studies of repeat proteins, a class proteins consisting tandem arrays small structural motifs that stack approximately linearly to produce elongated structures. We discuss the observation that, despite lacking long-range tertiary interactions are thought be hallmark globular protein stability, can as stable and co-orperatively folded their counterparts. The symmetry inherent in structures arrays, however, means there many partly species (whether it intermediates or transition states) have similar stabilities. Consequently they do distinct folding properties compared with these manifest behaviour both at equilibrium under kinetic conditions. Thus, when studying one appears probing moving target: relatively perturbation, by mutation for example, result shift different intermediate state. growing literature on illustrates how modular architecture adapted remarkable array biological physical roles, vivo vitro. Further, simple makes them uniquely amenable redesign—of function—promising exciting possibilities future research.

参考文章(88)
Christopher G. M. Wilson, Tommi Kajander, Lynne Regan, The crystal structure of NlpI. A prokaryotic tetratricopeptide repeat protein with a globular fold. FEBS Journal. ,vol. 272, pp. 166- 179 ,(2004) , 10.1111/J.1432-1033.2004.04397.X
Yih-Cherng Liou, Ante Tocilj, Peter L. Davies, Zongchao Jia, Mimicry of ice structure by surface hydroxyls and water of a β-helix antifreeze protein Nature. ,vol. 406, pp. 322- 324 ,(2000) , 10.1038/35018604
T. O. Street, C. M. Bradley, D. Barrick, Predicting coupling limits from an experimentally determined energy landscape Proceedings of the National Academy of Sciences of the United States of America. ,vol. 104, pp. 4907- 4912 ,(2007) , 10.1073/PNAS.0608756104
David Serquera, Whasil Lee, Giovanni Settanni, Piotr E. Marszalek, Emanuele Paci, Laura S. Itzhaki, Mechanical Unfolding of an Ankyrin Repeat Protein Biophysical Journal. ,vol. 98, pp. 1294- 1301 ,(2010) , 10.1016/J.BPJ.2009.12.4287
H. Kaspar Binz, Andreas Kohl, Andreas Plückthun, Markus G. Grütter, Crystal structure of a consensus-designed ankyrin repeat protein: implications for stability. Proteins. ,vol. 65, pp. 280- 284 ,(2006) , 10.1002/PROT.20930
Christina Marchetti Bradley, Doug Barrick, The Notch Ankyrin Domain Folds via a Discrete, Centralized Pathway Structure. ,vol. 14, pp. 1303- 1312 ,(2006) , 10.1016/J.STR.2006.06.013
Michael S. Evans, Ian M. Sander, Patricia L. Clark, Cotranslational Folding Promotes β-Helix Formation and Avoids Aggregation In Vivo Journal of Molecular Biology. ,vol. 383, pp. 683- 692 ,(2008) , 10.1016/J.JMB.2008.07.035
Tommi Kajander, Aitziber L. Cortajarena, Ewan R. G. Main, Simon G. J. Mochrie, Lynne Regan, A new folding paradigm for repeat proteins Journal of the American Chemical Society. ,vol. 127, pp. 10188- 10190 ,(2005) , 10.1021/JA0524494
Ewan RG Main, Sophie E Jackson, Lynne Regan, The folding and design of repeat proteins: reaching a consensus Current Opinion in Structural Biology. ,vol. 13, pp. 482- 489 ,(2003) , 10.1016/S0959-440X(03)00105-2