Sequence Divergence of Seryl-tRNA Synthetases in Archaea

作者: Hyun-soo Kim , Ute C. Vothknecht , Reiner Hedderich , Ivana Celic , Dieter Söll

DOI: 10.1128/JB.180.24.6446-6449.1998

关键词:

摘要: The genomic sequences of Methanococcus jannaschii and Methanobacterium thermoautotrophicum contain a structurally uncommon seryl-tRNA synthetase (SerRS) sequence lack an open reading frame (ORF) for the canonical cysteinyl-tRNA (CysRS). Therefore, it is not clear if Cys-tRNACys formed by direct aminoacylation or transformation serine misacylated to tRNACys. To address this question, we prepared SerRS from two methanogenic archaea measured enzymatic properties these proteins. was purified M. thermoautotrophicum; its N-terminal peptide matched deduced relevant ORF in data jannaschii. In addition, expressed cloned maripaludis serS gene. enzymes charged their homologous tRNAs also accepted Escherichia coli tRNA as substrate aminoacylation. Gel shift experiments showed that did mischarge tRNACys with serine. This indicates acylation organisms.

参考文章(20)
Christian Baron, August Böck, The Selenocysteine-Inserting tRNA Species: Structure and Function American Society of Microbiology. pp. 529- 544 ,(1995) , 10.1128/9781555818333.CH26
Uttam L RajBhandary, Dieter Gerhard Söll, Trna: Structure, Biosynthesis, and Function ,(1995)
C. J. Bult, O. White, G. J. Olsen, L. Zhou, R. D. Fleischmann, G. G. Sutton, J. A. Blake, L. M. FitzGerald, R. A. Clayton, J. D. Gocayne, A. R. Kerlavage, B. A. Dougherty, J.-F. Tomb, M. D. Adams, C. I. Reich, R. Overbeek, E. F. Kirkness, K. G. Weinstock, J. M. Merrick, A. Glodek, J. L. Scott, N. S. M. Geoghagen, J. F. Weidman, J. L. Fuhrmann, D. Nguyen, T. R. Utterback, J. M. Kelley, J. D. Peterson, P. W. Sadow, M. C. Hanna, M. D. Cotton, K. M. Roberts, M. A. Hurst, B. P. Kaine, M. Borodovsky, H.-P. Klenk, C. M. Fraser, H. O. Smith, C. R. Woese, J. C. Venter, COMPLETE GENOME SEQUENCE OF THE METHANOGENIC ARCHAEON, $i(METHANOCOCCUS JANNASCHII) Science. ,vol. 273, pp. 1058- 1073 ,(1997) , 10.1126/SCIENCE.273.5278.1058
D R Smith, L A Doucette-Stamm, C Deloughery, H Lee, J Dubois, T Aldredge, R Bashirzadeh, D Blakely, R Cook, K Gilbert, D Harrison, L Hoang, P Keagle, W Lumm, B Pothier, D Qiu, R Spadafora, R Vicaire, Y Wang, J Wierzbowski, R Gibson, N Jiwani, A Caruso, D Bush, J N Reeve, Complete genome sequence of Methanobacterium thermoautotrophicum deltaH: functional analysis and comparative genomics. Journal of Bacteriology. ,vol. 179, pp. 7135- 7155 ,(1997) , 10.1128/JB.179.22.7135-7155.1997
Gilbert Eriani, Marc Delarue, Olivier Poch, Jean Gangloff, Dino Moras, Partition of tRNA synthetases into two classes based on mutually exclusive sets of sequence motifs Nature. ,vol. 347, pp. 203- 206 ,(1990) , 10.1038/347203A0
Jeffrey A. Kowalak, Joseph J. Dalluge, James A. McCloskey, Karl O. Stetter, The role of posttranscriptional modification in stabilization of transfer RNA from hyperthermophiles. Biochemistry. ,vol. 33, pp. 7869- 7876 ,(1994) , 10.1021/BI00191A014
M. Ibba, J. L. Bono, P. A. Rosa, D. Soll, Archaeal-type lysyl-tRNA synthetase in the Lyme disease spirochete Borrelia burgdorferi Proceedings of the National Academy of Sciences of the United States of America. ,vol. 94, pp. 14383- 14388 ,(1997) , 10.1073/PNAS.94.26.14383
Boris Lenhard, Sanda Filipić, Irena Landeka, Ivan Škrtić, Dieter Söll, Ivana Weygand-Durašević, Defining the Active Site of Yeast Seryl-tRNA Synthetase MUTATIONS IN MOTIF 2 LOOP RESIDUES AFFECT tRNA-DEPENDENT AMINO ACID RECOGNITION Journal of Biological Chemistry. ,vol. 272, pp. 1136- 1141 ,(1997) , 10.1074/JBC.272.2.1136