Quantum chemical and molecular mechanics studies on the assessment of interactions between resveratrol and mutant SOD1 (G93A) protein.

作者: E. Srinivasan , R. Rajasekaran

DOI: 10.1007/S10822-018-0175-1

关键词:

摘要: Amyotrophic lateral sclerosis (ALS) is a neurodegenerative disease that has been associated with mutations in metalloenzyme superoxide dismutase (SOD1) causing protein structural destabilization and aggregation. However, the mechanistic action cure for still remain obscure. Herein, we initially studied conformational preferences of SOD1 structures upon substitution Ala at Gly93 comparison wild type. Our results corroborated previous experimental studies on aggregation destabilizing activity mutant G93A. On therapeutic point view, computationally analyzed influence resveratrol, natural polyphenol widely found red wine relative to type, using molecular docking studies. Further, FMO calculations were performed, GAMESS study pair residual interaction type complex systems. Consequently, resveratrol showed greater than Subsequently, evaluated systems, where earlier lose their stability was regained, binding resveratrol. Similar trend 2-D free energy landscapes both Hence, combined biophysical quantum chemical our supported studies, thereby stipulating an paving way design highly potent effective inhibitors against fALS affecting mankind.

参考文章(72)
Rachel L. Redler, Nikolay V. Dokholyan, The Complex Molecular Biology of Amyotrophic Lateral Sclerosis (ALS) Progress in Molecular Biology and Translational Science. ,vol. 107, pp. 215- 262 ,(2012) , 10.1016/B978-0-12-385883-2.00002-3
Nilanjana Maulik, Pawan K Singal, Hajime Otani, Ramesh Vidavalur, Significance of wine and resveratrol in cardiovascular disease: French paradox revisited. Experimental & Clinical Cardiology. ,vol. 11, pp. 217- 225 ,(2006)
Ester Tellone, Antonio Galtieri, Annamaria Russo, Bruno Giardina, Silvana Ficarra, Resveratrol: A Focus on Several Neurodegenerative Diseases Oxidative Medicine and Cellular Longevity. ,vol. 2015, pp. 392169- 392169 ,(2015) , 10.1155/2015/392169
R. L. Redler, D. Shirvanyants, O. Dagliyan, F. Ding, D. N. Kim, P. Kota, E. A. Proctor, S. Ramachandran, A. Tandon, N. V. Dokholyan, Computational approaches to understanding protein aggregation in neurodegeneration Journal of Molecular Cell Biology. ,vol. 6, pp. 104- 115 ,(2014) , 10.1093/JMCB/MJU007
David Porquet, Christian Griñán-Ferré, Isidre Ferrer, Antoni Camins, Coral Sanfeliu, Jaume del Valle, Mercè Pallàs, Neuroprotective role of trans-resveratrol in a murine model of familial Alzheimer's disease Journal of Alzheimer's Disease. ,vol. 42, pp. 1209- 1220 ,(2014) , 10.3233/JAD-140444
Steven S. Plotkin, Atanu Das, Mechanical probes of SOD1 predict systematic trends in metal and dimer affinity of ALS-associated mutants. Journal of Molecular Biology. ,vol. 425, pp. 850- 874 ,(2013) , 10.1016/J.JMB.2012.12.022
Berk Hess, Carsten Kutzner, David van der Spoel, Erik Lindahl, GROMACS 4: Algorithms for highly efficient, load-balanced, and scalable molecular simulation Journal of Chemical Theory and Computation. ,vol. 4, pp. 435- 447 ,(2008) , 10.1021/CT700301Q
Francesca Achilli, Shelagh Boyle, Dairin Kieran, Ruth Chia, Majid Hafezparast, Joanne E. Martin, Giampietro Schiavo, Linda Greensmith, Wendy Bickmore, Elizabeth M. C. Fisher, The SOD1 transgene in the G93A mouse model of amyotrophic lateral sclerosis lies on distal mouse chromosome 12. Amyotrophic Lateral Sclerosis. ,vol. 6, pp. 111- 114 ,(2005) , 10.1080/14660820510035351
Arifumi Matsumoto, Yohei Okada, Masanori Nakamichi, Masaya Nakamura, Yoshiaki Toyama, Gen Sobue, Makiko Nagai, Masashi Aoki, Yasuto Itoyama, Hideyuki Okano, Disease progression of human SOD1 (G93A) transgenic ALS model rats. Journal of Neuroscience Research. ,vol. 83, pp. 119- 133 ,(2006) , 10.1002/JNR.20708