Pressure- and heat-induced protein unfolding in bacterial cells: crowding vs. sticking.

作者: Timothy Chen , Kapil Dave , Martin Gruebele

DOI: 10.1002/1873-3468.13025

关键词:

摘要: In-cell protein stability is increased by crowding, but can be reduced destabilizing surface interactions. Will different denaturation techniques yield similar trends? Here, we apply pressure and thermal to green fluorescent protein/ReAsH-labeled yeast phosphoglycerate kinase (PGK) in Escherichia coli cells. Pressure more two state-like E. than vitro, stabilizing the native state. Thermal destabilizes PGK coli, unlike mammalian Results wild-type MG1655 strain are corroborated pressure-resistant J1 strain, where less prone aggregation. Thus, interactions overcome crowding cytoplasm under denaturation, not denaturation.

参考文章(33)
Martina Cappelletti, Alessandro Presentato, Giorgio Milazzo, Raymond J. Turner, Stefano Fedi, Dario Frascari, Davide Zannoni, Growth of Rhodococcus sp. strain BCP1 on gaseous n-alkanes: new metabolic insights and transcriptional analysis of two soluble di-iron monooxygenase genes. Frontiers in Microbiology. ,vol. 6, pp. 1- 15 ,(2015) , 10.3389/FMICB.2015.00393
Kangcheng Ruan, Chunhe Xu, Tingting Li, Jiong Li, Reinhard Lange, Claude Balny, The thermodynamic analysis of protein stabilization by sucrose and glycerol against pressure-induced unfolding. The typical example of the 33-kDa protein from spinach photosystem II European Journal of Biochemistry. ,vol. 270, pp. 1654- 1661 ,(2003) , 10.1046/J.1432-1033.2003.03485.X
Kiera M. Considine, Alan L. Kelly, Gerald F. Fitzgerald, Colin Hill, Roy D. Sleator, High‐pressure processing – effects on microbial food safety and food quality Fems Microbiology Letters. ,vol. 281, pp. 1- 9 ,(2008) , 10.1111/J.1574-6968.2008.01084.X
A. Dhar, K. Girdhar, D. Singh, H. Gelman, S. Ebbinghaus, M. Gruebele, Protein Stability and Folding Kinetics in the Nucleus and Endoplasmic Reticulum of Eucaryotic Cells Biophysical Journal. ,vol. 101, pp. 421- 430 ,(2011) , 10.1016/J.BPJ.2011.05.071
Noel T. Southall, Ken A. Dill, A. D. J. Haymet, A View of the Hydrophobic Effect Journal of Physical Chemistry B. ,vol. 106, pp. 521- 533 ,(2002) , 10.1021/JP015514E
Martin Gruebele, Downhill protein folding: evolution meets physics Comptes Rendus Biologies. ,vol. 328, pp. 701- 712 ,(2005) , 10.1016/J.CRVI.2005.02.007
J. Roche, J. A. Caro, D. R. Norberto, P. Barthe, C. Roumestand, J. L. Schlessman, A. E. Garcia, B. Garcia-Moreno E., C. A. Royer, Cavities determine the pressure unfolding of proteins Proceedings of the National Academy of Sciences of the United States of America. ,vol. 109, pp. 6945- 6950 ,(2012) , 10.1073/PNAS.1200915109
T. Vellai, G. Vida, The origin of eukaryotes: the difference between prokaryotic and eukaryotic cells. Proceedings of The Royal Society B: Biological Sciences. ,vol. 266, pp. 1571- 1577 ,(1999) , 10.1098/RSPB.1999.0817
Jerson L Silva, Debora Foguel, Catherine A Royer, Pressure provides new insights into protein folding, dynamics and structure. Trends in Biochemical Sciences. ,vol. 26, pp. 612- 618 ,(2001) , 10.1016/S0968-0004(01)01949-1
Voichita M. Dadarlat, Carol Beth Post, Insights into Protein Compressibility from Molecular Dynamics Simulations Journal of Physical Chemistry B. ,vol. 105, pp. 715- 724 ,(2001) , 10.1021/JP0024118