Pattern analysis in a benthic bacteria-nutrient system

作者: Daniel Wetzel

DOI:

关键词:

摘要: We study pattern formation in a reaction-diffusion system for benthic bacteria-nutrient model marine sediment, which originally contains some spatially varying coefficients and with these shows layering of patterns. Using the Landau reduction homogeneous coefficients, we locally analyze Turing bifurcations 1D 2D. Moreover, use software pde2path to compute corresponding branches globally find number snaking patterns over This that are not necessarily due coefficients. type hexagon patches on background no prior mention literature. show first numerically calculated solution-branch, connects two different types hexagons parameter space. call states this branch rectangles. check numerically, if stability changes stripes, continued homogeneously into third dimension. stripes one have same stable range bounded 2D 3D domains, while other becomes unstable earlier. Here solutions, spatial between hexagonal prisms genuine (balls).

参考文章(15)
J.J. Middelburg, S. Madani, F.J.R. Meysman, Biogeochemical modelling of sediments from the Santa Barbara basin (California) BioGeoChemistry of Tidal Flats. Proceedings of a Workshop at the Hanse Institute of Advanced Study, May 14-17, Delmenhorst, Germany. pp. 89- 90 ,(2003)
S. M. Houghton, E. Knobloch, Homoclinic snaking in bounded domains. Physical Review E. ,vol. 80, pp. 026210- 026210 ,(2009) , 10.1103/PHYSREVE.80.026210
John Burke, Edgar Knobloch, Homoclinic snaking: structure and stability. Chaos. ,vol. 17, pp. 037102- 037102 ,(2007) , 10.1063/1.2746816
John Burke, Edgar Knobloch, Localized states in the generalized Swift-Hohenberg equation. Physical Review E. ,vol. 73, pp. 056211- ,(2006) , 10.1103/PHYSREVE.73.056211
Koen Siteur, Eric Siero, Maarten B. Eppinga, Jens D.M. Rademacher, Arjen Doelman, Max Rietkerk, Beyond Turing: The response of patterned ecosystems to environmental change Ecological Complexity. ,vol. 20, pp. 81- 96 ,(2014) , 10.1016/J.ECOCOM.2014.09.002
T K Callahan, E Knobloch, Symmetry-breaking bifurcations on cubic lattices Nonlinearity. ,vol. 10, pp. 1179- 1216 ,(1997) , 10.1088/0951-7715/10/5/009
Daniele Avitabile, David J. B. Lloyd, John Burke, Edgar Knobloch, Björn Sandstede, To snake or not to snake in the planar Swift-Hohenberg equation Siam Journal on Applied Dynamical Systems. ,vol. 9, pp. 704- 733 ,(2010) , 10.1137/100782747
J. H. P. Dawes, Localized Pattern Formation with a Large-Scale Mode: Slanted Snaking Siam Journal on Applied Dynamical Systems. ,vol. 7, pp. 186- 206 ,(2008) , 10.1137/06067794X
Y. Pomeau, Front motion, metastability and subcritical bifurcations in hydrodynamics Physica D: Nonlinear Phenomena. ,vol. 23, pp. 3- 11 ,(1986) , 10.1016/0167-2789(86)90104-1
A. Ameryk, Z. J. Mudryk, J. Bolałek, B. Podgórska, The occurrence and activity of sulphate-reducing bacteria in the bottom sediments of the Gulf of Gdańsk Oceanologia. ,vol. 42, pp. 105- 117 ,(2000)