Range-Wide Snow Leopard Phylogeography Supports Three Subspecies.

作者: Jan E. Janecka , Zhang Yu-guang , Li Di-qiang , Bariushaa Munkhtsog , Munkhtsog Bayaraa

DOI: 10.1093/JHERED/ESX044

关键词:

摘要: The snow leopard, Panthera uncia, is an elusive high-altitude specialist that inhabits vast, inaccessible habitat across Asia. We conducted the first range-wide genetic assessment of leopards based on noninvasive scat surveys. Thirty-three microsatellites were genotyped and a total 683 bp mitochondrial DNA sequenced in 70 individuals. Snow exhibited low diversity at (AN = 5.8, HO 0.433, HE 0.568), virtually no mtDNA variation, underwent bottleneck Holocene (∼8000 years ago) coinciding with increased temperatures, precipitation, upward treeline shift Tibetan Plateau. Multiple analyses supported 3 primary clusters: (1) Northern (the Altai region), (2) Central (core Himalaya Plateau), (3) Western (Tian Shan, Pamir, trans-Himalaya regions). Accordingly, we recognize subspecies, uncia irbis (Northern group), (Western uncioides (Central group) upon distinctness, levels admixture, unambiguous population assignment, geographic separation. patterns variation consistent desert-basin "barrier effects" Gobi isolating northern subspecies (Mongolia), dividing central (Qinghai, Tibet, Bhutan, Nepal) western (India, Pakistan, Tajikistan, Kyrgyzstan). Hierarchical Bayesian clustering analysis revealed additional subdivision into minimum 6 proposed management units: Mongolia, southern Tian Pamir-Himalaya, Tibet-Himalaya, Qinghai, spatial autocorrelation suggesting potential connectivity by dispersing individuals up to ∼400 km. provide foundation for global conservation leopard set stage in-depth landscape genetics genomic studies.

参考文章(91)
Sergeĭ Ulʹi︠a︡novich Stroganov, Carnivorous mammals of Siberia ,(1969)
Jr R. M. Ball, John Alroy, Principles of genealogical concordance in species concepts and biological taxonomy Oxford Surveys in Evolutionary Biology. ,vol. 7, ,(1990)
JE Janečka, ME Tewes, LL Laack, A Caso, LI Grassman, Jr, AM Haines, DB Shindle, BW Davis, WJ Murphy, RL Honeycutt, Reduced genetic diversity and isolation of remnant ocelot populations occupying a severely fragmented landscape in southern Texas Animal Conservation. ,vol. 14, pp. 608- 619 ,(2011) , 10.1111/J.1469-1795.2011.00475.X
George B. Schaller, Wildlife of the Tibetan steppe ,(1998)
J. E. Janecka, S. S. E. Nielsen, S. D. Andersen, F. G. Hoffmann, R. E. Weber, T. Anderson, J. F. Storz, A. Fago, Genetically based low oxygen affinities of felid hemoglobins: lack of biochemical adaptation to high-altitude hypoxia in the snow leopard The Journal of Experimental Biology. ,vol. 218, pp. 2402- 2409 ,(2015) , 10.1242/JEB.125369
Brian J. Smith, BOA: AN R PACKAGE FOR MCMC OUTPUT CONVER-GENCE ASSESSMENT AND POSTERIOR INFERENCE Journal of Statistical Software. ,vol. 21, pp. 1- 37 ,(2007) , 10.18637/JSS.V021.I11
Mark A. Beaumont, Detecting population expansion and decline using microsatellites. Genetics. ,vol. 153, pp. 2013- 2029 ,(1999) , 10.1093/GENETICS/153.4.2013
Philip Riordan, Samuel A. Cushman, David Mallon, Kun Shi, Joelene Hughes, Predicting global population connectivity and targeting conservation action for snow leopard across its range Ecography. ,vol. 39, pp. 419- 426 ,(2016) , 10.1111/ECOG.01691
AARON B. A. SHAFER, CATHERINE I. CULLINGHAM, STEEVE D. CÔTÉ, DAVID W. COLTMAN, Of glaciers and refugia: a decade of study sheds new light on the phylogeography of northwestern North America. Molecular Ecology. ,vol. 19, pp. 4589- 4621 ,(2010) , 10.1111/J.1365-294X.2010.04828.X