Computational and experimental analysis of TAL effector-DNA binding

作者: Erin Lynn Doyle

DOI: 10.31274/ETD-180810-2733

关键词:

摘要:

参考文章(131)
Joshua F. Meckler, Mital S. Bhakta, Moon-Soo Kim, Robert Ovadia, Chris H. Habrian, Artem Zykovich, Abigail Yu, Sarah H. Lockwood, Robert Morbitzer, Janett Elsäesser, Thomas Lahaye, David J. Segal, Enoch P. Baldwin, Quantitative analysis of TALE–DNA interactions suggests polarity effects Nucleic Acids Research. ,vol. 41, pp. 4118- 4128 ,(2013) , 10.1093/NAR/GKT085
Adrian W. Briggs, Xavier Rios, Raj Chari, Luhan Yang, Feng Zhang, Prashant Mali, George M. Church, Iterative capped assembly: rapid and scalable synthesis of repeat-module DNA such as TAL effectors from individual monomers Nucleic Acids Research. ,vol. 40, ,(2012) , 10.1093/NAR/GKS624
M. B. Mudgett, O. Chesnokova, D. Dahlbeck, E. T. Clark, O. Rossier, U. Bonas, B. J. Staskawicz, Molecular signals required for type III secretion and translocation of the Xanthomonas campestris AvrBs2 protein to pepper plants Proceedings of the National Academy of Sciences of the United States of America. ,vol. 97, pp. 13324- 13329 ,(2000) , 10.1073/PNAS.230450797
Sebastian Bultmann, Robert Morbitzer, Christine S. Schmidt, Katharina Thanisch, Fabio Spada, Janett Elsaesser, Thomas Lahaye, Heinrich Leonhardt, Targeted transcriptional activation of silent oct4 pluripotency gene by combining designer TALEs and inhibition of epigenetic modifiers Nucleic Acids Research. ,vol. 40, pp. 5368- 5377 ,(2012) , 10.1093/NAR/GKS199
Stéphane Genin, Timothy P. Denny, Pathogenomics of the Ralstonia solanacearum Species Complex Annual Review of Phytopathology. ,vol. 50, pp. 67- 89 ,(2012) , 10.1146/ANNUREV-PHYTO-081211-173000
Jeffry D. Sander, Peter Zaback, J. Keith Joung, Daniel F. Voytas, Drena Dobbs, An affinity-based scoring scheme for predicting DNA-binding activities of modularly assembled zinc-finger proteins Nucleic Acids Research. ,vol. 37, pp. 506- 515 ,(2009) , 10.1093/NAR/GKN962
Jeffry D Sander, Elizabeth J Dahlborg, Mathew J Goodwin, Lindsay Cade, Feng Zhang, Daniel Cifuentes, Shaun J Curtin, Jessica S Blackburn, Stacey Thibodeau-Beganny, Yiping Qi, Christopher J Pierick, Ellen Hoffman, Morgan L Maeder, Cyd Khayter, Deepak Reyon, Drena Dobbs, David M Langenau, Robert M Stupar, Antonio J Giraldez, Daniel F Voytas, Randall T Peterson, Jing-Ruey J Yeh, J Keith Joung, Selection-free zinc-finger-nuclease engineering by context-dependent assembly (CoDA) Nature Methods. ,vol. 8, pp. 67- 69 ,(2011) , 10.1038/NMETH.1542
Jens Boch, Ulla Bonas, Xanthomonas AvrBs3 Family-Type III Effectors: Discovery and Function Annual Review of Phytopathology. ,vol. 48, pp. 419- 436 ,(2010) , 10.1146/ANNUREV-PHYTO-080508-081936
J. K. Joung, E. I. Ramm, C. O. Pabo, A bacterial two-hybrid selection system for studying protein–DNA and protein–protein interactions Proceedings of the National Academy of Sciences of the United States of America. ,vol. 97, pp. 7382- 7387 ,(2000) , 10.1073/PNAS.110149297
Yong Zhang, Feng Zhang, Xiaohong Li, Joshua A. Baller, Yiping Qi, Colby G. Starker, Adam J. Bogdanove, Daniel F. Voytas, Transcription Activator-Like Effector Nucleases Enable Efficient Plant Genome Engineering Plant Physiology. ,vol. 161, pp. 20- 27 ,(2012) , 10.1104/PP.112.205179