Evolutionary Dynamics of the Prokaryotic Adaptive Immunity System CRISPR-Cas in an Explicit Ecological Context
作者： J. Iranzo , A. E. Lobkovsky , Y. I. Wolf , E. V. Koonin
DOI: 10.1128/JB.00412-13
关键词:
摘要: … CRISPR array content on the fraction of immune interactions and … -Cas, we explore the “three-species system” that consists of … By varying parameter b across 1 order of magnitude, we …
sci-hub.se 参考文章(89)
Jed A. Fuhrman, Community structure and function in prokaryotic marine plankton. Antonie Van Leeuwenhoek International Journal of General and Molecular Microbiology. ,vol. 81, pp. 521- 527 ,(2002) , 10.1023/A:1020513506777
Steven F. Railsback, Volker Grimm, Individual-based modeling and ecology ,(2005)
Curtis A. Suttle, Marine viruses — major players in the global ecosystem Nature Reviews Microbiology. ,vol. 5, pp. 801- 812 ,(2007) , 10.1038/NRMICRO1750
Susanne Erdmann, Roger A. Garrett, Selective and hyperactive uptake of foreign DNA by adaptive immune systems of an archaeon via two distinct mechanisms. Molecular Microbiology. ,vol. 85, pp. 1044- 1056 ,(2012) , 10.1111/J.1365-2958.2012.08171.X
David Bikard, Asma Hatoum-Aslan, Daniel Mucida, Luciano A. Marraffini, CRISPR Interference Can Prevent Natural Transformation and Virulence Acquisition during In Vivo Bacterial Infection Cell Host & Microbe. ,vol. 12, pp. 177- 186 ,(2012) , 10.1016/J.CHOM.2012.06.003
Adi Stern, Rotem Sorek, The phage-host arms race: Shaping the evolution of microbes BioEssays. ,vol. 33, pp. 43- 51 ,(2011) , 10.1002/BIES.201000071
Kimberley D. Seed, David W. Lazinski, Stephen B. Calderwood, Andrew Camilli, A bacteriophage encodes its own CRISPR/Cas adaptive response to evade host innate immunity Nature. ,vol. 494, pp. 489- 491 ,(2013) , 10.1038/NATURE11927
Huaiyang Zhou, Jiangtao Li, Xiaotong Peng, Jun Meng, Fengping Wang, Yuncan Ai, Microbial diversity of a sulfide black smoker in main endeavour hydrothermal vent field, Juan de Fuca Ridge The Journal of Microbiology. ,vol. 47, pp. 235- 247 ,(2009) , 10.1007/S12275-008-0311-Z
Lei Qi, Rachel E Haurwitz, Wenjun Shao, Jennifer A Doudna, Adam P Arkin, RNA processing enables predictable programming of gene expression Nature Biotechnology. ,vol. 30, pp. 1002- 1006 ,(2012) , 10.1038/NBT.2355
Anne Kupczok, Jonathan P Bollback, Probabilistic models for CRISPR spacer content evolution BMC Evolutionary Biology. ,vol. 13, pp. 54- 54 ,(2013) , 10.1186/1471-2148-13-54