Shifting the metallocentric molybdoenzyme paradigm: the importance of pyranopterin coordination

作者: Richard A. Rothery , Joel H. Weiner

DOI: 10.1007/S00775-014-1194-6

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摘要: In this review, we test the hypothesis that pyranopterin coordination plays a critical role in defining substrate reactivities four families of mononuclear molybdenum and tungsten enzymes (Mo/W-enzymes). Enzyme containing single dithiolene chelate have been demonstrated to reactivity towards two (sulfite oxidase, SUOX-fold) five (xanthine dehydrogenase, XDH-fold) types substrate, whereas major family bis-pyranopterin (dimethylsulfoxide reductase, DMSOR-fold) is reactive eight substrate. A second enzyme (aldehyde oxidoreductase, AOR-fold) catalyzes type reaction. The diversity reactions catalyzed by each correlates with active site variability, also number pyranopterins their protein. case AOR-fold enzymes, inflexibility limited specificity (oxidation aldehydes). examples SUOX-fold DMSOR-fold observe three histidine-containing charge-transfer relays can: (1) connect piperazine ring substrate-binding (SUOX-fold enzymes); (2) provide inter-pyranopterin communication (DMSOR-fold (3) pyran oxygen deeply buried water molecules (the NarGHI-type nitrate reductases). Finally, sequence data mining reveals bacterial species whose predicted proteomes contain large numbers (up 64) Mo/W-enzymes, being dominant. These analyses reveal an inverse correlation between Mo/W-enzyme content pathogenicity.

参考文章(121)
Asha Rajapakshe, Gordon Tollin, John H. Enemark, Kinetic and thermodynamic effects of mutations of human sulfite oxidase. Chemistry & Biodiversity. ,vol. 9, pp. 1621- 1634 ,(2012) , 10.1002/CBDV.201200010
Mirjam Czjzek, Jean-Philippe Dos Santos, Janine Pommier, Gérard Giordano, Vincent Méjean, Richard Haser, Crystal structure of oxidized trimethylamine N-oxide reductase from Shewanella massilia at 2.5 å resolution Journal of Molecular Biology. ,vol. 284, pp. 435- 447 ,(1998) , 10.1006/JMBI.1998.2156
Frauke Baymann, Evelyne Lebrun, Myriam Brugna, Barbara Schoepp–Cothenet, Marie–Thérèse Giudici–Orticoni, Wolfgang Nitschke, The redox protein construction kit: pre-last universal common ancestor evolution of energy-conserving enzymes. Philosophical Transactions of the Royal Society B. ,vol. 358, pp. 267- 274 ,(2003) , 10.1098/RSTB.2002.1184
Robert Hänsch, Christina Lang, Erik Riebeseel, Rainer Lindigkeit, Arthur Gessler, Heinz Rennenberg, Ralf R. Mendel, Plant Sulfite Oxidase as Novel Producer of H2O2 Journal of Biological Chemistry. ,vol. 281, pp. 6884- 6888 ,(2006) , 10.1074/JBC.M513054200
Changjian Feng, Heather L. Wilson, John K. Hurley, James T. Hazzard, Gordon Tollin, K. V. Rajagopalan, John H. Enemark, Role of Conserved Tyrosine 343 in Intramolecular Electron Transfer in Human Sulfite Oxidase Journal of Biological Chemistry. ,vol. 278, pp. 2913- 2920 ,(2003) , 10.1074/JBC.M210374200
Arnold M. Raitsimring, Andrei V. Astashkin, Changjian Feng, Heather L. Wilson, K.V. Rajagopalan, John H. Enemark, Studies of the Mo(V) Center of the Y343F Mutant of Human Sulfite Oxidase by Variable Frequency Pulsed EPR Spectroscopy Inorganica Chimica Acta. ,vol. 361, pp. 941- 946 ,(2008) , 10.1016/J.ICA.2007.05.023
Lodovica Loschi, Stephen J. Brokx, Tanya L. Hills, Glen Zhang, Michela G. Bertero, Andrew L. Lovering, Joel H. Weiner, Natalie C. J. Strynadka, Structural and biochemical identification of a novel bacterial oxidoreductase. Journal of Biological Chemistry. ,vol. 279, pp. 50391- 50400 ,(2004) , 10.1074/JBC.M408876200
Petra Hänzelmann, Holger Dobbek, Lothar Gremer, Robert Huber, Ortwin Meyer, The effect of intracellular molybdenum in Hydrogenophaga pseudoflava on the crystallographic structure of the seleno-molybdo-iron-sulfur flavoenzyme carbon monoxide dehydrogenase. Journal of Molecular Biology. ,vol. 301, pp. 1221- 1235 ,(2000) , 10.1006/JMBI.2000.4023
Olaf Kniemeyer, Johann Heider, Ethylbenzene Dehydrogenase, a Novel Hydrocarbon-oxidizing Molybdenum/Iron-Sulfur/Heme Enzyme Journal of Biological Chemistry. ,vol. 276, pp. 21381- 21386 ,(2001) , 10.1074/JBC.M101679200