Intramolecular vibrational redistribution in the non-radiative excited state decay of uracil in the gas phase: an ab initio molecular dynamics study

作者: Philippe Carbonniere , Claude Pouchan , Roberto Improta

DOI: 10.1039/C4CP05265J

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摘要: We report a study of intramolecular vibrational distribution (IVR) occurring in the electronic ground state uracil (S0) gas phase, following photoexcitation lowest energy bright excited (Sπ) and decay through ethylene-like Sπ/S0 Conical Intersection (CI-0π). To this aim we have performed 20 independent ab initio molecular dynamics simulations starting from CI-0π (ten them with 1 eV kinetic randomly distributed over different degrees freedom) 10 minimum (Franck–Condon, FC, point), excess equal to gap between FC point. The simulations, exploiting PBE0/6-31G(d) calculations, were an overall period ps. A thorough statistical analysis variation geometrical parameters during simulation time among freedom provides consistent picture IVR process. In first 0–200 fs structural involve mainly recovery average planarity. 200–600 range, substantial activation CO NH is observed. After 500–600 most reach values similar those found after ps, though system cannot be considered equilibrium yet.

参考文章(80)
Philipp Marquetand, Martin Richter, Leticia González, Sebastian Mai, Excitation of nucleobases from a computational perspective II: dynamics. Topics in Current Chemistry. ,vol. 355, pp. 99- 153 ,(2014) , 10.1007/128_2014_549
P. M. Felker, A. H. Zewail, Ultrafast dynamics of IVR in molecules and reactions Springer Netherlands. pp. 222- 308 ,(1995) , 10.1007/978-94-011-1314-4_7
Angelo Giussani, Javier Segarra-Martí, Daniel Roca-Sanjuán, Manuela Merchán, Excitation of Nucleobases from a Computational Perspective I: Reaction Paths Topics in Current Chemistry. ,vol. 355, pp. 57- 97 ,(2013) , 10.1007/128_2013_501
Felipe Cordova, L. Joubert Doriol, Andrei Ipatov, Mark E. Casida, Claudia Filippi, Alberto Vela, Troubleshooting time-dependent density-functional theory for photochemical applications: oxirane. Journal of Chemical Physics. ,vol. 127, pp. 164111- 164111 ,(2007) , 10.1063/1.2786997
Dana Nachtigallová, Adélia J. A. Aquino, Jaroslaw J. Szymczak, Mario Barbatti, Pavel Hobza, Hans Lischka, Nonadiabatic dynamics of uracil: population split among different decay mechanisms. Journal of Physical Chemistry A. ,vol. 115, pp. 5247- 5255 ,(2011) , 10.1021/JP201327W
Xing Zhang, John M. Herbert, Excited-State Deactivation Pathways in Uracil versus Hydrated Uracil: Solvatochromatic Shift in the 1nπ* State is the Key Journal of Physical Chemistry B. ,vol. 118, pp. 7806- 7817 ,(2014) , 10.1021/JP412092F
Roberto Improta, Alessandro Lami, Vincenzo Barone, Fabrizio Santoro, Time‐dependent and time‐independent approaches for the computation of absorption spectra of Uracil derivatives in solution International Journal of Quantum Chemistry. ,vol. 110, pp. 624- 636 ,(2010) , 10.1002/QUA.22180
Y. Yamada, N. Mikami, T. Ebata, Relaxation dynamics of NH stretching vibrations of 2-aminopyridine and its dimer in a supersonic beam Proceedings of the National Academy of Sciences of the United States of America. ,vol. 105, pp. 12690- 12695 ,(2008) , 10.1073/PNAS.0800354105
R. M. Hochstrasser, Two-dimensional spectroscopy at infrared and optical frequencies. Proceedings of the National Academy of Sciences of the United States of America. ,vol. 104, pp. 14190- 14196 ,(2007) , 10.1073/PNAS.0704079104
Yonggang He, Chengyin Wu, Wei Kong, Decay Pathways of Thymine and Methyl-Substituted Uracil and Thymine in the Gas Phase Journal of Physical Chemistry A. ,vol. 107, pp. 5145- 5148 ,(2003) , 10.1021/JP034733S