Diagnostic accuracy of in-house real-time PCR assay for Mycobacterium tuberculosis: a systematic review and meta-analysis.

作者: Zhenhong Wei , Xiaoping Zhang , Chaojun Wei , Liang Yao , Yonghong Li

DOI: 10.1186/S12879-019-4273-Z

关键词:

摘要: In recent years, studies on the diagnostic accuracy of in-house real-time PCR (hRT-PCR) assay for detection Mycobacterium tuberculosis (Mtb) have been reported with unignorable discrepancies. To assess overall hRT-PCR Mtb diagnosis in different samples individuals active pulmonary and extra-pulmonary infection, a systematic review meta-analysis were performed. The PUBMED, EMBASE, Web Science, Cochrane databases searched up to June 2017 eligible that estimated sensitivity specificity respiratory non-respiratory infection patients, culture as reference standard. Bivariate random effect models used provide pooled estimation accuracy. Further, subgroup meta-regression analyses performed explore sources heterogeneity. risk bias was assessed by QUADAS-2 tool. Of 3589 candidate studies, 18 met our inclusion criteria. Compared data, 0.96 0.92, respectively. odds ratio (DOR) 192.96 (95% CI 68.46, 543.90), area under summary ROC curve (AUC) 0.9791. There significant heterogeneity among enrolled (p < 0.001). high-quality assessment application specimen associated better low-income/high-burden settings, results suggested could be useful test TB high specificity.

参考文章(53)
F S Nolte, B Metchock, J E McGowan, A Edwards, O Okwumabua, C Thurmond, P S Mitchell, B Plikaytis, T Shinnick, Direct detection of Mycobacterium tuberculosis in sputum by polymerase chain reaction and DNA hybridization Journal of Clinical Microbiology. ,vol. 31, pp. 1777- 1782 ,(1993) , 10.1128/JCM.31.7.1777-1782.1993
J A. Knottnerus, Evaluation of diagnostic procedures BMJ. ,vol. 324, pp. 477- 480 ,(2002) , 10.1136/BMJ.324.7335.477
D Thierry, A Brisson-Noël, V Vincent-Lévy-Frébault, S Nguyen, J L Guesdon, B Gicquel, Characterization of a Mycobacterium tuberculosis insertion sequence, IS6110, and its application in diagnosis. Journal of Clinical Microbiology. ,vol. 28, pp. 2668- 2673 ,(1990) , 10.1128/JCM.28.12.2668-2673.1990
Kailash Aggarwal, Deepthi Nair, Mukul Aggarwal, Have we made any headway in the diagnosis of neurotuberculosis? Place of real time PCR or real time PCR Journal of Pediatric infectious diseases. ,vol. 07, pp. 139- 143 ,(2015) , 10.3233/JPI-120362
T Kocagöz, E Yilmaz, S Ozkara, S Kocagöz, M Hayran, M Sachedeva, H F Chambers, Detection of Mycobacterium tuberculosis in sputum samples by polymerase chain reaction using a simplified procedure. Journal of Clinical Microbiology. ,vol. 31, pp. 1435- 1438 ,(1993) , 10.1128/JCM.31.6.1435-1438.1993
Ram Pramod Tiwari, Narendra S. Hattikudur, Ramesh N. Bharmal, S. Kartikeyan, Neeta M. Deshmukh, Prakash S. Bisen, Modern approaches to a rapid diagnosis of tuberculosis: promises and challenges ahead. Tuberculosis. ,vol. 87, pp. 193- 201 ,(2007) , 10.1016/J.TUBE.2006.07.005
E. Penz, J. Boffa, D. J. Roberts, D. Fisher, R. Cooper, P. E. Ronksley, M. T. James, Diagnostic accuracy of the Xpert® MTB/RIF assay for extra-pulmonary tuberculosis: a meta-analysis. International Journal of Tuberculosis and Lung Disease. ,vol. 19, pp. 278- 284 ,(2015) , 10.5588/IJTLD.14.0262
G T Noordhoek, J A Kaan, S Mulder, H Wilke, A H Kolk, Routine application of the polymerase chain reaction for detection of Mycobacterium tuberculosis in clinical samples. Journal of Clinical Pathology. ,vol. 48, pp. 810- 814 ,(1995) , 10.1136/JCP.48.9.810
David Moher, Alessandro Liberati, Jennifer Tetzlaff, Douglas G Altman, None, Preferred reporting items for systematic reviews and meta-analyses: The PRISMA statement International Journal of Surgery. ,vol. 8, pp. 336- 341 ,(2010) , 10.1016/J.IJSU.2010.02.007
M. Inoue, W. Y. Tang, S. Y. Wee, T. Barkham, Audit and improve! Evaluation of a real-time probe-based PCR assay with internal control for the direct detection of Mycobacterium tuberculosis complex. European Journal of Clinical Microbiology & Infectious Diseases. ,vol. 30, pp. 131- 135 ,(2011) , 10.1007/S10096-010-1059-Z