Uneven genotypic diversity of Escherichia coli in fecal sources limits the performance of a library-dependent method of microbial source tracking on the southwestern French Atlantic coast
作者： Frédéric Garabetian , Isabelle Vitte , Antoine Sabourin , Hélène Moussard , Adeline Jouanillou
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摘要: To develop a library-dependent method of tracking fecal sources contamination beaches on the Atlantic coast southwestern France, library 6368 Escherichia coli isolates was constructed...
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Shuai Zhi, Qiaozhi Li, Yutaka Yasui, Thomas Edge, Edward Topp, Norman F. Neumann, Assessing host-specificity of Escherichia coli using a supervised learning logic-regression-based analysis of single nucleotide polymorphisms in intergenic regions. Molecular Phylogenetics and Evolution. ,vol. 92, pp. 72- 81 ,(2015) , 10.1016/J.YMPEV.2015.06.007
Jean Joris, Nicolas Marchant, SPECTROMÉTRIE DE MASSE MALDI-TOF EN BACTÉRIOLOGIE CLINIQUE OU COMMENT IDENTIFIER UNE BACTÉRIE EN UNE MINUTE Revue médicale de Liège. ,vol. 65, pp. 29- 34 ,(2010)
Ahmed Warish, Cheryl Triplett, Ryota Gomi, Pradip Gyawali, Leonie Hodgers, Simon Toze, Assessment of Genetic Markers for Tracking the Sources of Human Wastewater Associated Escherichia coli in Environmental Waters. Environmental Science & Technology. ,vol. 49, pp. 9341- 9346 ,(2015) , 10.1021/ACS.EST.5B02163
Valerie J. Harwood, Bruce Wiggins, Charles Hagedorn, R. D. Ellender, Jan Gooch, James Kern, Mansour Samadpour, Annie C. H. Chapman, Brian J. Robinson, Brian C. Thompson, Phenotypic library-based microbial source tracking methods: efficacy in the California collaborative study. Journal of Water and Health. ,vol. 1, pp. 153- 166 ,(2003) , 10.2166/WH.2003.0018
Neelja Singhal, Manish Kumar, Pawan K Kanaujia, Jugsharan S Virdi, None, MALDI-TOF mass spectrometry: an emerging technology for microbial identification and diagnosis. Frontiers in Microbiology. ,vol. 6, pp. 791- 791 ,(2015) , 10.3389/FMICB.2015.00791
Alban Ramette, Multivariate analyses in microbial ecology. FEMS Microbiology Ecology. ,vol. 62, pp. 142- 160 ,(2007) , 10.1111/J.1574-6941.2007.00375.X
David M. Gordon, Olivier Clermont, Heather Tolley, Erick Denamur, Assigning Escherichia coli strains to phylogenetic groups: multi‐locus sequence typing versus the PCR triplex method Environmental Microbiology. ,vol. 10, pp. 2484- 2496 ,(2008) , 10.1111/J.1462-2920.2008.01669.X
B A Wiggins, Discriminant analysis of antibiotic resistance patterns in fecal streptococci, a method to differentiate human and animal sources of fecal pollution in natural waters. Applied and Environmental Microbiology. ,vol. 62, pp. 3997- 4002 ,(1996) , 10.1128/AEM.62.11.3997-4002.1996
Martin A. Claydon, Simon N. Davey, Valeria Edwards-Jones, Derek B. Gordon, The rapid identification of intact microorganisms using mass spectrometry Nature Biotechnology. ,vol. 14, pp. 1584- 1586 ,(1996) , 10.1038/NBT1196-1584