Inferences of Individual Drug Response-Related Long Non-coding RNAs Based on Integrating Multi-omics Data in Breast Cancer.

作者: Hao Cui , Hanqing Kong , Fuhui Peng , Chunjing Wang , Dandan Zhang

DOI: 10.1016/J.OMTN.2020.01.038

关键词:

摘要: … Adriamycin drug response for BRCA resistance was inferred. … lncRNA-based evaluation of clinical drug responses in BRCA… 5 mg/L Adriamycin when compared with normal BRCA cells. …

参考文章(44)
Kazuhiro Ikeda, Kuniko Horie-Inoue, Toshihide Ueno, Takashi Suzuki, Wataru Sato, Takashi Shigekawa, Akihiko Osaki, Toshiaki Saeki, Eugene Berezikov, Hiroyuki Mano, Satoshi Inoue, None, miR-378a-3p modulates tamoxifen sensitivity in breast cancer MCF-7 cells through targeting GOLT1A Scientific Reports. ,vol. 5, pp. 13170- 13170 ,(2015) , 10.1038/SREP13170
Pavel Sumazin, Xuerui Yang, Hua-Sheng Chiu, Wei-Jen Chung, Archana Iyer, David Llobet-Navas, Presha Rajbhandari, Mukesh Bansal, Paolo Guarnieri, Jose Silva, Andrea Califano, An extensive microRNA-mediated network of RNA-RNA interactions regulates established oncogenic pathways in glioblastoma. Cell. ,vol. 147, pp. 370- 381 ,(2012) , 10.1016/J.CELL.2011.09.041
Mitchell Guttman, John L. Rinn, Modular regulatory principles of large non-coding RNAs Nature. ,vol. 482, pp. 339- 346 ,(2012) , 10.1038/NATURE10887
Mitchell Guttman, Manuel Garber, Joshua Z Levin, Julie Donaghey, James Robinson, Xian Adiconis, Lin Fan, Magdalena J Koziol, Andreas Gnirke, Chad Nusbaum, John L Rinn, Eric S Lander, Aviv Regev, Ab initio reconstruction of cell type–specific transcriptomes in mouse reveals the conserved multi-exonic structure of lincRNAs Nature Biotechnology. ,vol. 28, pp. 503- 510 ,(2010) , 10.1038/NBT.1633
M Mourtada-Maarabouni, M R Pickard, V L Hedge, F Farzaneh, G T Williams, GAS5, a non-protein-coding RNA, controls apoptosis and is downregulated in breast cancer. Oncogene. ,vol. 28, pp. 195- 208 ,(2009) , 10.1038/ONC.2008.373
Min Jiang, Ou Huang, Zuoquan Xie, Shuchao Wu, Xi Zhang, Aijun Shen, Hongchun Liu, Xiaosong Chen, Jiayi Wu, Ying Lou, Yan Mao, Kan Sun, Shudong Hu, Meiyu Geng, Kunwei Shen, A novel long non-coding RNA-ARA: adriamycin resistance-associated. Biochemical Pharmacology. ,vol. 87, pp. 254- 283 ,(2014) , 10.1016/J.BCP.2013.10.020
Aaron R. Quinlan, Ira M. Hall, BEDTools: a flexible suite of utilities for comparing genomic features Bioinformatics. ,vol. 26, pp. 841- 842 ,(2010) , 10.1093/BIOINFORMATICS/BTQ033
Hang Zhao, Xueqing Zhang, Josias Brito Frazão, Antonio Condino-Neto, Peter E. Newburger, HOX antisense lincRNA HOXA-AS2 is an apoptosis repressor in all Trans retinoic acid treated NB4 promyelocytic leukemia cells Journal of Cellular Biochemistry. ,vol. 114, pp. 2375- 2383 ,(2013) , 10.1002/JCB.24586
Stein Aerts, Diether Lambrechts, Sunit Maity, Peter Van Loo, Bert Coessens, Frederik De Smet, Leon-Charles Tranchevent, Bart De Moor, Peter Marynen, Bassem Hassan, Peter Carmeliet, Yves Moreau, None, Gene prioritization through genomic data fusion. Nature Biotechnology. ,vol. 24, pp. 537- 544 ,(2006) , 10.1038/NBT1203
Mohamed I Nounou, Fatema ElAmrawy, Nada Ahmed, Kamilia Abdelraouf, Satyanarayana Goda, Hussaini Syed-Sha-Qhattal, None, Breast Cancer: Conventional Diagnosis and Treatment Modalities and Recent Patents and Technologies. Breast Cancer: Basic and Clinical Research. ,vol. 2015, pp. 17- 34 ,(2015) , 10.4137/BCBCR.S29420