Release of extraction-resistant mRNA in stationary phase Saccharomyces cerevisiae produces a massive increase in transcript abundance in response to stress.

作者: AnthonyD Aragon , GabrielA Quiñones , EdwardV Thomas , Sushmita Roy , Margaret Werner-Washburne

DOI: 10.1186/GB-2006-7-2-R9

关键词:

摘要: Background: As carbon sources are exhausted, Saccharomyces cerevisiae cells exhibit reduced metabolic activity and cultures enter the stationary phase. We asked whether in phase respond to additional stress at level of transcript abundance. Results: Microarrays were used quantify changes abundance from response stress. More than 800 mRNAs increased by one minute after oxidative A significant number these encode proteins involved responses. tested mRNA increases due new transcription, rapid poly-adenylation message (which would not be detected microarrays), or potential release mature present cell but resistant extraction during RNA isolation. Examination an polymerase II mutant, rpb1-1, suggested that transcription was required. Quantitative RT-PCR analysis a subset transcripts further isolated total polyadenylated. In contrast, over 2,000 protease treatment cellfree lysates exponentially growing cultures. Different subsets released temperature upshift, suggesting is stress-specific. Conclusions: Cells contain large extraction-resistant protease-labile, rapidly releasable form. The appears stressspecific. hypothesize associated with P-bodies.

参考文章(52)
Y. Sanchez, J. Taulien, K.A. Borkovich, S. Lindquist, Hsp104 is required for tolerance to many forms of stress. The EMBO Journal. ,vol. 11, pp. 2357- 2364 ,(1992) , 10.1002/J.1460-2075.1992.TB05295.X
E K Fuge, E L Braun, M Werner-Washburne, Protein synthesis in long-term stationary-phase cultures of Saccharomyces cerevisiae. Journal of Bacteriology. ,vol. 176, pp. 5802- 5813 ,(1994) , 10.1128/JB.176.18.5802-5813.1994
M Werner-Washburne, E Braun, G C Johnston, R A Singer, Stationary phase in the yeast Saccharomyces cerevisiae. Microbiological Research. ,vol. 57, pp. 383- 401 ,(1993) , 10.1128/MR.57.2.383-401.1993
Joanna Rytka, Piotr Koprowski, Piotr A. Mieczkowski, Zygmunt Cieśla, Marta U. Fikus, Ewa Śledziewska-Gójska, The product of the DNA damage-inducible gene of Saccharomyces cerevisiae, DIN7, specifically functions in mitochondria. Genetics. ,vol. 154, pp. 73- 81 ,(2000) , 10.1093/GENETICS/154.1.73
M Nonet, C Scafe, J Sexton, R Young, Eucaryotic RNA polymerase conditional mutant that rapidly ceases mRNA synthesis. Molecular and Cellular Biology. ,vol. 7, pp. 1602- 1611 ,(1987) , 10.1128/MCB.7.5.1602
Muriel Brengues, Daniela Teixeira, Roy Parker, Movement of eukaryotic mRNAs between polysomes and cytoplasmic processing bodies. Science. ,vol. 310, pp. 486- 489 ,(2005) , 10.1126/SCIENCE.1115791
M. Goebl, J Yochem, S Jentsch, J. McGrath, A Varshavsky, B Byers, The yeast cell cycle gene CDC34 encodes a ubiquitin-conjugating enzyme. Science. ,vol. 241, pp. 1331- 1335 ,(1988) , 10.1126/SCIENCE.2842867