Utility of polyhistidine-tagged ubiquitin in the purification of ubiquitin-protein conjugates and as an affinity ligand for the purification of ubiquitin-specific hydrolases.

作者: E.P. Beers , J Callis

DOI: 10.1016/S0021-9258(20)80590-0

关键词:

摘要: The purification and biochemical characterization of protein substrates the ubiquitin-dependent pathway proteolysis is made difficult in part by low steady state levels ubiquitin-protein conjugates. We report here on use a polyhistidine-tagged ubiquitin molecule (HisUb) for conjugates metal chelate chromatography. When Escherichia coli extracts containing expressed HisUb were passed through nitrilotriacetic acid-agarose column immobilized Ni2+ ions (Ni-NTA column), was retained. After washing to remove unbound nonspecifically bound proteins, pH 4.5 wash used elute highly purified HisUb. Purified wild-type tested their ability form Ni(2+)-binding wheat germ vitro conjugation reaction. In some experiments, preincubated with iodoacetamide inhibit activating conjugating enzymes. Only those assays an ATP-regenerating system not pretreated produced significant multiple also examined potential as affinity ligand higher plant ubiquitin-specific hydrolases. As test, crude lysate E. expressing yeast hydrolase (Yuh1) Ni-NTA Yuh1 retained specifically eluted when equilibrated buffer ubiquitin.

参考文章(33)
R.T. Baker, J.W. Tobias, A Varshavsky, Ubiquitin-specific proteases of Saccharomyces cerevisiae. Cloning of UBP2 and UBP3, and functional analysis of the UBP gene family. Journal of Biological Chemistry. ,vol. 267, pp. 23364- 23375 ,(1992) , 10.1016/S0021-9258(18)50100-9
R D Vierstra, S M Langan, A L Haas, Purification and initial characterization of ubiquitin from the higher plant, Avena sativa. Journal of Biological Chemistry. ,vol. 260, pp. 12015- 12021 ,(1985) , 10.1016/S0021-9258(17)38978-0
M. Magnani, G. Serafini, A. Antonelli, M. Malatesta, G. Gazzanelli, Evidence for a particulate location of ubiquitin conjugates and ubiquitin-conjugating enzymes in rabbit brain. Journal of Biological Chemistry. ,vol. 266, pp. 21018- 21024 ,(1991) , 10.1016/S0021-9258(18)54814-6
E. Eytan, T. Armon, H. Heller, S. Beck, A. Hershko, Ubiquitin C-terminal hydrolase activity associated with the 26 S protease complex. Journal of Biological Chemistry. ,vol. 268, pp. 4668- 4674 ,(1993) , 10.1016/S0021-9258(18)53448-7
A L Haas, J V Warms, A Hershko, I A Rose, Ubiquitin-activating enzyme. Mechanism and role in protein-ubiquitin conjugation. Journal of Biological Chemistry. ,vol. 257, pp. 2543- 2548 ,(1982) , 10.1016/S0021-9258(18)34958-5
T Hadari, J V Warms, I A Rose, A Hershko, A ubiquitin C-terminal isopeptidase that acts on polyubiquitin chains. Role in protein degradation. Journal of Biological Chemistry. ,vol. 267, pp. 719- 727 ,(1992) , 10.1016/S0021-9258(18)48343-3
A L Haas, P M Bright, The immunochemical detection and quantitation of intracellular ubiquitin-protein conjugates Journal of Biological Chemistry. ,vol. 260, pp. 12464- 12473 ,(1985) , 10.1016/S0021-9258(17)38895-6
E.P. Beers, T.N. Moreno, J Callis, Subcellular localization of ubiquitin and ubiquitinated proteins in Arabidopsis thaliana. Journal of Biological Chemistry. ,vol. 267, pp. 15432- 15439 ,(1992) , 10.1016/S0021-9258(19)49552-5
M.J. Ellison, M. Hochstrasser, Epitope-tagged ubiquitin. A new probe for analyzing ubiquitin function. Journal of Biological Chemistry. ,vol. 266, pp. 21150- 21157 ,(1991) , 10.1016/S0021-9258(18)54833-X
C M Pickart, I A Rose, Ubiquitin carboxyl-terminal hydrolase acts on ubiquitin carboxyl-terminal amides. Journal of Biological Chemistry. ,vol. 260, pp. 7903- 7910 ,(1985) , 10.1016/S0021-9258(17)39538-8