Prediction of protein-protein interaction sites using patch analysis

作者: Susan Jones , Janet M Thornton

DOI: 10.1006/JMBI.1997.1233

关键词:

摘要: … that gives the probability of a surface patch forming protein-protein interactions. Predictions … from 28 homo-dimers, large protomers from 11 hetero-complexes, small protomers from 14 …

参考文章(31)
J Janin, C Chothia, The structure of protein-protein recognition sites. Journal of Biological Chemistry. ,vol. 265, pp. 16027- 16030 ,(1990) , 10.1016/S0021-9258(17)46181-3
Peter H. Walls, Michael J.E. Sternberg, New algorithm to model protein-protein recognition based on surface complementarity. Applications to antibody-antigen docking. Journal of Molecular Biology. ,vol. 228, pp. 277- 297 ,(1992) , 10.1016/0022-2836(92)90506-F
Clarence E. Schutt, James C. Myslik, Michael D. Rozycki, Nalin C. W. Goonesekere, Uno Lindberg, The structure of crystalline profilin-beta-actin. Nature. ,vol. 365, pp. 810- 816 ,(1993) , 10.1038/365810A0
Yasuo Takeuchi, Yoshinori Satow, Kazuo T. Nakamura, Yukio Mitsui, Refined crystal structure of the complex of subtilisin BPN' and Streptomyces subtilisin inhibitor at 1.8 A resolution. Journal of Molecular Biology. ,vol. 221, pp. 309- 325 ,(1991) , 10.1016/0022-2836(91)80221-F
Michael L. Connolly, Shape complementarity at the hemoglobin α1β1 subunit interface Biopolymers. ,vol. 25, pp. 1229- 1247 ,(1986) , 10.1002/BIP.360250705
Fan Jiang, Sung-Hou Kim, “Soft docking”: Matching of molecular surface cubes Journal of Molecular Biology. ,vol. 219, pp. 79- 102 ,(1991) , 10.1016/0022-2836(91)90859-5
Boguslaw Stec, Lukasz Lebioda, Refined Structure of Yeast Apo-enolase at 2.25 A Resolution Journal of Molecular Biology. ,vol. 211, pp. 235- 248 ,(1990) , 10.1016/0022-2836(90)90023-F
Douglas L. Smith, Steven C. Almo, Michael D. Toney, Dagmar Ringe, 2.8-A-resolution crystal structure of an active-site mutant of aspartate aminotransferase from Escherichia coli. Biochemistry. ,vol. 28, pp. 8161- 8167 ,(1989) , 10.1021/BI00446A030
Cyrus Chothia, Joël Janin, Principles of protein–protein recognition Nature. ,vol. 256, pp. 705- 708 ,(1975) , 10.1038/256705A0
Susan Jones, Janet M. Thornton, Protein-protein interactions: a review of protein dimer structures. Progress in Biophysics & Molecular Biology. ,vol. 63, pp. 31- 65 ,(1995) , 10.1016/0079-6107(94)00008-W