Assignment of all four disulfide bridges in echistatin.

作者: Mark Bauer , Yiping Sun , Charles Degenhardt , Barbara Kozikowski

DOI: 10.1007/BF01024934

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摘要: Echistatin is a 49-amino-acid protein fromEchis carinatus venom. It contains four disulfide bonds. Since the bonding critical for biological activity, it very important to assign linkage in this protein. was incubated 250 mM oxalic acid at 100°C 4 hr under nitrogen. Under these conditions, many overlapping disulfide-containing peptides were identified by ionspray mass spectrometry. Ionspray MS/MS data indicate that bonds are Cys 2–Cys 11, 7–Cys 32, 8–Cys 37, and 20–Cys 39. To our knowledge, first time all echistatin have been assigned one experiment without bond exchange. This approach, which combines hydrolysis MS/MS, may be useful assigning bridges other proteins from disintegrin family.

参考文章(16)
P. Roepstorff, J. Fohlman, Letter to the editors Biological Mass Spectrometry. ,vol. 11, pp. 601- 601 ,(1984) , 10.1002/BMS.1200111109
Claudio DALVIT, Hans WIDMER, Gunter BOVERMANN, Robin BRECKENRIDGE, Rainer METTERNICH, 1H NMR studies of echistatin in solution. Sequential resonance assignments and secondary structure. FEBS Journal. ,vol. 202, pp. 315- 321 ,(1991) , 10.1111/J.1432-1033.1991.TB16378.X
R. Yazdanparast, P.C. Andrews, D.L. Smith, J.E. Dixon, Assignment of disulfide bonds in proteins by fast atom bombardment mass spectrometry. Journal of Biological Chemistry. ,vol. 262, pp. 2507- 2513 ,(1987) , 10.1016/S0021-9258(18)61533-9
Robert M. COOKE, Brian G. CARTER, David M. A. MARTIN, Peter MURRAY-RUST, Malcolm P. WEIR, Nuclear magnetic resonance studies of the snake toxin echistatin 1H resonance assignments and secondary structure FEBS Journal. ,vol. 202, pp. 323- 328 ,(1991) , 10.1111/J.1432-1033.1991.TB16379.X
Xue-Jun Tang, Robert K. Boyd, M. J. Bertrand, An investigation of fragmentation mechanisms of doubly protonated tryptic peptides Rapid Communications in Mass Spectrometry. ,vol. 6, pp. 651- 657 ,(1992) , 10.1002/RCM.1290061105
Juan J. Calvete, Yuqin Wang, Karlheinz Mann, Wolfram Schäfer, Stefan Niewiarowski, Gwendolyn J. Stewart, The disulfide bridge pattern of snake venom disintegrins, flavoridin and echistatin. FEBS Letters. ,vol. 309, pp. 316- 320 ,(1992) , 10.1016/0014-5793(92)80797-K
Vladimir Saudek, R. Andrew Atkinson, John T. Pelton, Three-dimensional structure of echistatin, the smallest active RGD protein. Biochemistry. ,vol. 30, pp. 7369- 7372 ,(1991) , 10.1021/BI00244A003
Yuan Chen, Steven M. Pitzenberger, Victor M. Garsky, Patricia K. Lumma, Gautam Sanyal, Jean Baum, Proton NMR assignments and secondary structure of the snake venom protein echistatin. Biochemistry. ,vol. 30, pp. 11625- 11636 ,(1991) , 10.1021/BI00114A004
R. J. Gould, M. A. Polokoff, P. A. Friedman, T.-F. Huang, J. C. Holt, J. J. Cook, S. Niewiarowski, Disintegrins: A Family of Integrin Inhibitory Proteins from Viper Venoms Experimental Biology and Medicine. ,vol. 195, pp. 168- 171 ,(1990) , 10.3181/00379727-195-43129B
V. M. Garsky, P. K. Lumma, R. M. Freidinger, S. M. Pitzenberger, W. C. Randall, D. F. Veber, R. J. Gould, P. A. Friedman, Chemical synthesis of echistatin, a potent inhibitor of platelet aggregation from Echis carinatus: synthesis and biological activity of selected analogs. Proceedings of the National Academy of Sciences. ,vol. 86, pp. 4022- 4026 ,(1989) , 10.1073/PNAS.86.11.4022