Abundant Raw Material for Cis-Regulatory Evolution in Humans

作者: Matthew V. Rockman , Gregory A. Wray

DOI: 10.1093/OXFORDJOURNALS.MOLBEV.A004023

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摘要: Changes in gene expression and regulation--due particular to the evolution of cis-regulatory DNA sequences--may underlie many evolutionary changes phenotypes, yet little is known about distribution such variation populations. We present this study first survey experimentally validated functional polymorphism. These data are derived from more than 140 polymorphisms involved regulation 107 genes Homo sapiens, eukaryote species with most available data. find that widespread human genome consequent twofold or greater for 63% surveyed. Transcription factor-DNA interactions highly polymorphic, regulatory have been gained lost within On average, humans heterozygous at sites (>16,000) amino acid positions (<13,000), part because an overrepresentation among former multiallelic tandem repeat variation, especially (AC)(n) dinucleotide microsatellites. The role microsatellites may provide a larger store heritable phenotypic rapid mutational input has realized. Finally, we outline distinctive consequences genotype-phenotype relationship, including ubiquitous epistasis genotype-by-environment interactions, as well underappreciated modes pleiotropy overdominance. Ordinary small-scale mutations contribute pervasive transcription rates consequently patterns variation.

参考文章(91)
Shamil Sunyaev, Jens Hanke, David Brett, Atakan Aydin, Inga Zastrow, Warren Lathe, Peer Bork, Jens Reich, Individual variation in protein-coding sequences of human genome Advances in Protein Chemistry. ,vol. 54, pp. 409- 437 ,(2000) , 10.1016/S0065-3233(00)54012-1
John B. S. Haldane, The Causes of Evolution ,(1966)
James F. Crow, The genetic basis of evolutionary change American Journal of Human Genetics. ,vol. 27, pp. 249- 251 ,(1975)
Tricia D. LeVan, John W. Bloom, Thomas J. Bailey, Christopher L. Karp, Marilyn Halonen, Fernando D. Martinez, Donata Vercelli, A Common Single Nucleotide Polymorphism in the CD14 Promoter Decreases the Affinity of Sp Protein Binding and Enhances Transcriptional Activity The Journal of Immunology. ,vol. 167, pp. 5838- 5844 ,(2001) , 10.4049/JIMMUNOL.167.10.5838
Mark McCarthy, Weighing in on diabetes risk. Nature Genetics. ,vol. 19, pp. 209- 210 ,(1998) , 10.1038/876
Daniel L. Hartl, Andrew G. Clark, Principles of population genetics ,(1980)
Eric H. Davidson, Genomic Regulatory Systems: Development and Evolution Academic Press. ,(2005)
Theodosius Grigorievich Dobzhansky, Genetics and the Origin of Species ,(1937)