Identification of a copper-repressible C-type heme protein of Methylococcus capsulatus (Bath). A member of a novel group of the bacterial di-heme cytochrome c peroxidase family of proteins

作者: Odd A. Karlsen , Louise Kindingstad , Solveig M. Angelskar , Live J. Bruseth , Daniel Straume

DOI: 10.1111/J.1742-4658.2005.05020.X

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摘要: Genomic sequencing of the methanotrophic bacterium, Methylococcus capsulatus (Bath), revealed an open reading frame (MCA2590) immediately upstream previously described mopE gene (MCA2589). Sequence analyses deduced amino acid sequence demonstrated that MCA2590-encoded protein shared significant, but restricted, similarity to bacterial di-heme cytochrome c peroxidase (BCCP) family proteins. Two putative C-type heme-binding motifs were predicted, and confirmed by positive heme staining. Immunospecific recognition biotinylation whole cells combined with MS expression MCA2590 in M. as a noncovalently associated cellular surface bacterium exposed cell exterior. Similar MopE, is regulated bioavailability copper most abundant cultures grown under low conditions, thus indicating important physiological role these growth conditions. distinguished from characterized members BCCP containing much longer primary generates increased distance between two its sequence. Furthermore, localization contrast periplasmic location reported members. Based on our experimental bioinformatical analyses, we suggest member novel group peroxidases not characterized.

参考文章(36)
Amos Marc Bairoch, Elisabeth Gasteiger, Alexandre Gattiker, ScanProsite: a reference implementation of a PROSITE scanning tool. Applied Bioinformatics. ,vol. 1, pp. 107- 108 ,(2002)
David J. Bergmann, James A. Zahn, Alan A. DiSpirito, High-Molecular-Mass Multi-c-Heme Cytochromes from Methylococcus capsulatus Bath Journal of Bacteriology. ,vol. 181, pp. 991- 997 ,(1999) , 10.1128/JB.181.3.991-997.1999
C F Goodhew, I B Wilson, D J Hunter, G W Pettigrew, The cellular location and specificity of bacterial cytochrome c peroxidases. Biochemical Journal. ,vol. 271, pp. 707- 712 ,(1990) , 10.1042/BJ2710707
D.W. Dorward, Detection and Quantitation of Heme-Containing Proteins by Chemiluminescence Analytical Biochemistry. ,vol. 209, pp. 219- 223 ,(1993) , 10.1006/ABIO.1993.1110
Naomi Ward, Øivind Larsen, James Sakwa, Live Bruseth, Hoda Khouri, A Scott Durkin, George Dimitrov, Lingxia Jiang, David Scanlan, Katherine H Kang, Matt Lewis, Karen E Nelson, Barbara Methé, Martin Wu, John F Heidelberg, Ian T Paulsen, Derrick Fouts, Jacques Ravel, Hervé Tettelin, Qinghu Ren, Tim Read, Robert T DeBoy, Rekha Seshadri, Steven L Salzberg, Harald B Jensen, Nils Kåre Birkeland, William C Nelson, Robert J Dodson, Svenn H Grindhaug, Ingeborg Holt, Ingvar Eidhammer, Inge Jonasen, Susan Vanaken, Terry Utterback, Tamara V Feldblyum, Claire M Fraser, Johan R Lillehaug, Jonathan A Eisen, None, Genomic Insights into Methanotrophy: The Complete Genome Sequence of Methylococcus capsulatus (Bath) PLoS Biology. ,vol. 2, pp. e303- 1628 ,(2004) , 10.1371/JOURNAL.PBIO.0020303
Marjaana Rönnberg, Nils Ellfolk, Heme-linked properties of Pseudomonas cytochrome c peroxidase. Evidence for non-equivalence of the hemes. Biochimica et Biophysica Acta. ,vol. 581, pp. 325- 333 ,(1979) , 10.1016/0005-2795(79)90252-6
Arwen R. Pearson, Teresa De la Mora-Rey, M. Elizabeth Graichen, Yongting Wang, Limei H. Jones, Sudha Marimanikkupam, Sean A. Agger, Paul A. Grimsrud, Victor L. Davidson, Carrie M. Wilmot, Further insights into quinone cofactor biogenesis: probing the role of mauG in methylamine dehydrogenase tryptophan tryptophylquinone formation. Biochemistry. ,vol. 43, pp. 5494- 5502 ,(2004) , 10.1021/BI049863L
Adel M. Talaat, Preston Hunter, Stephen Albert Johnston, Genome-directed primers for selective labeling of bacterial transcripts for DNA microarray analysis. Nature Biotechnology. ,vol. 18, pp. 679- 682 ,(2000) , 10.1038/76543