High‐Resolution Interrogation of Biological Systems via Mass Cytometry

Maria Célia Jamur, Constance Oliver, Permeabilization of cell membranes. Methods of Molecular Biology. ,vol. 588, pp. 63- 66 ,(2010) , 10.1007/978-1-59745-324-0_9

Tiffany J. Chen, Nikesh Kotecha, Cytobank: Providing an Analytics Platform for Community Cytometry Data Analysis and Collaboration Current Topics in Microbiology and Immunology. ,vol. 377, pp. 127- 157 ,(2014) , 10.1007/82_2014_364

M. H. Spitzer, P. F. Gherardini, G. K. Fragiadakis, N. Bhattacharya, R. T. Yuan, A. N. Hotson, R. Finck, Y. Carmi, E. R. Zunder, W. J. Fantl, S. C. Bendall, E. G. Engleman, G. P. Nolan, IMMUNOLOGY. An interactive reference framework for modeling a dynamic immune system. Science. ,vol. 349, pp. 1259425- 1259425 ,(2015) , 10.1126/SCIENCE.1259425

Clustering Large Applications (Program CLARA) John Wiley & Sons, Inc.. pp. 126- 163 ,(2008) , 10.1002/9780470316801.CH3

Gregory K. Behbehani, Colin Thom, Eli R. Zunder, Rachel Finck, Brice Gaudilliere, Gabriela K. Fragiadakis, Wendy J. Fantl, Garry P. Nolan, Transient partial permeabilization with saponin enables cellular barcoding prior to surface marker staining. Cytometry Part A. ,vol. 85, pp. 1011- 1019 ,(2014) , 10.1002/CYTO.A.22573

Chris P. Verschoor, Alina Lelic, Jonathan L. Bramson, Dawn M. E. Bowdish, An Introduction to Automated Flow Cytometry Gating Tools and Their Implementation Frontiers in Immunology. ,vol. 6, pp. 380- 380 ,(2015) , 10.3389/FIMMU.2015.00380

Brice Gaudillière, Edward A. Ganio, Martha Tingle, Hope L. Lancero, Gabriela K. Fragiadakis, Quentin J. Baca, Nima Aghaeepour, Ronald J. Wong, Cele Quaintance, Yasser Y. El-Sayed, Gary M. Shaw, David B. Lewis, David K. Stevenson, Garry P. Nolan, Martin S. Angst, Implementing Mass Cytometry at the Bedside to Study the Immunological Basis of Human Diseases: Distinctive Immune Features in Patients with a History of Term or Preterm Birth Cytometry Part A. ,vol. 87, pp. 817- 829 ,(2015) , 10.1002/CYTO.A.22720

Jacob H. Levine, Erin F. Simonds, Sean C. Bendall, Kara L. Davis, El-ad D. Amir, Michelle D. Tadmor, Oren Litvin, Harris G. Fienberg, Astraea Jager, Eli R. Zunder, Rachel Finck, Amanda L. Gedman, Ina Radtke, James R. Downing, Dana Pe’er, Garry P. Nolan, Data-Driven Phenotypic Dissection of AML Reveals Progenitor-like Cells that Correlate with Prognosis. Cell. ,vol. 162, pp. 184- 197 ,(2015) , 10.1016/J.CELL.2015.05.047

Till Sörensen, Sabine Baumgart, Pawel Durek, Andreas Grützkau, Thomas Häupl, immunoClust—An automated analysis pipeline for the identification of immunophenotypic signatures in high‐dimensional cytometric datasets Cytometry Part A. ,vol. 87, pp. 603- 615 ,(2015) , 10.1002/CYTO.A.22626

Cariad Chester, Holden T. Maecker, Algorithmic Tools for Mining High-Dimensional Cytometry Data Journal of Immunology. ,vol. 195, pp. 773- 779 ,(2015) , 10.4049/JIMMUNOL.1500633