Decoding the complete arsenal for cellulose and hemicellulose deconstruction in the highly efficient cellulose decomposer Paenibacillus O199
作者： Rubén López-Mondéjar , Daniela Zühlke , Tomáš Větrovský , Dörte Becher , Katharina Riedel
DOI: 10.1186/S13068-016-0518-X
关键词:
摘要: Background The search for new enzymes and microbial strains to degrade plant biomass is one of the most important strategies improving conversion processes in production environment-friendly chemicals biofuels. In this study, we report a Paenibacillus isolate, O199, which showed highest efficiency cellulose deconstruction screen environmental isolates. Here, provide detailed description complex multi-component O199 enzymatic system involved degradation lignocellulose.
biomedcentral.com
springer.com
paperity.org参考文章(65)
A.I. Saeed, V. Sharov, J. White, J. Li, W. Liang, N. Bhagabati, J. Braisted, M. Klapa, T. Currier, M. Thiagarajan, A. Sturn, M. Snuffin, A. Rezantsev, D. Popov, A. Ryltsov, E. Kostukovich, I. Borisovsky, Z. Liu, A. Vinsavich, V. Trush, J. Quackenbush, TM4: a free, open-source system for microarray data management and analysis. BioTechniques. ,vol. 34, pp. 374- 378 ,(2003) , 10.2144/03342MT01
D. J. Lane, 16S/23S rRNA sequencing Nucleic acid techniques in bacterial systematics. pp. 115- 175 ,(1991)
Emanuel Berger, Dong Zhang, Vladimir V. Zverlov, Wolfgang H. Schwarz, Two noncellulosomal cellulases of Clostridium thermocellum, Cel9I and Cel48Y, hydrolyse crystalline cellulose synergistically. Fems Microbiology Letters. ,vol. 268, pp. 194- 201 ,(2007) , 10.1111/J.1574-6968.2006.00583.X
Jaroslav Šnajdr, Tomáš Cajthaml, Vendula Valášková, Věra Merhautová, Mirka Petránková, Peter Spetz, Kaisu Leppänen, Petr Baldrian, Transformation of Quercus petraea litter: successive changes in litter chemistry are reflected in differential enzyme activity and changes in the microbial community composition. FEMS Microbiology Ecology. ,vol. 75, pp. 291- 303 ,(2011) , 10.1111/J.1574-6941.2010.00999.X
Udo Wegmann, Petra Louis, Alexander Goesmann, Bernard Henrissat, Sylvia H. Duncan, Harry J. Flint, Complete genome of a new Firmicutes species belonging to the dominant human colonic microbiota (‘Ruminococcus bicirculans’) reveals two chromosomes and a selective capacity to utilize plant glucans Environmental Microbiology. ,vol. 16, pp. 2879- 2890 ,(2014) , 10.1111/1462-2920.12217
Inci Ozdemir, Sara E. Blumer-Schuette, Robert M. Kelly, S-Layer Homology Domain Proteins Csac_0678 and Csac_2722 Are Implicated in Plant Polysaccharide Deconstruction by the Extremely Thermophilic Bacterium Caldicellulosiruptor saccharolyticus Applied and Environmental Microbiology. ,vol. 78, pp. 768- 777 ,(2012) , 10.1128/AEM.07031-11
J. Susan van Dyk, Makiko Sakka, Kazuo Sakka, Brett I. Pletschke, Identification of endoglucanases, xylanases, pectinases and mannanases in the multi-enzyme complex of Bacillus licheniformis SVD1 Enzyme and Microbial Technology. ,vol. 47, pp. 112- 118 ,(2010) , 10.1016/J.ENZMICTEC.2010.05.004
J.S. Van Dyk, B.I. Pletschke, A review of lignocellulose bioconversion using enzymatic hydrolysis and synergistic cooperation between enzymes--factors affecting enzymes, conversion and synergy. Biotechnology Advances. ,vol. 30, pp. 1458- 1480 ,(2012) , 10.1016/J.BIOTECHADV.2012.03.002
Alexander W Eastman, David E Heinrichs, Ze-Chun Yuan, Comparative and genetic analysis of the four sequenced Paenibacillus polymyxa genomes reveals a diverse metabolism and conservation of genes relevant to plant-growth promotion and competitiveness BMC Genomics. ,vol. 15, pp. 851- 851 ,(2014) , 10.1186/1471-2164-15-851
Patthra Pason, Akihiko Kosugi, Rattiya Waeonukul, Chakrit Tachaapaikoon, Khanok Ratanakhanokchai, Takamitsu Arai, Yoshinori Murata, Jun Nakajima, Yutaka Mori, Purification and characterization of a multienzyme complex produced by Paenibacillus curdlanolyticus B-6 Applied Microbiology and Biotechnology. ,vol. 85, pp. 573- 580 ,(2010) , 10.1007/S00253-009-2117-2