Integration of Retrotransposons-Based Markers in a Linkage Map of Barley
作者： Monica Rodriguez , Donal O’Sullivan , Paolo Donini , Roberto Papa , Elena Chiapparino
DOI: 10.1007/S11032-005-4885-4
关键词:
摘要: A deeper understanding of random markers is important if they are to be employed for a range objectives. The sequence specific amplified polymorphism (S-SAP) technique powerful genetic analysis tool which exploits the high copy number retrotransposon long terminal repeats (LTRs) in plant genome. distribution and inheritance S-SAP bands barley genome was studied using Steptoe × Morex (S M) double haploid (DH) population. Six primer combinations generated 98 polymorphic bands, map positions were assigned all but one band. Eight putative co-dominant loci detected, representing 16 mapped markers. Thus at least 81 dominant. distributed along seven chromosomes tendency cluster observed. over concurred with knowledge retrotransposons plants. This experiment has demonstrated potential applied analyses such as fingerprinting, marker assisted breeding, biodiversity assessment phylogenetic analyses.
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Ignacio Romagosa, Feng Han, Steven E. Ullrich, Patrick M. Hayes, Darrell M. Wesenberg, Verification of yield QTL through realized molecular marker- assisted selection responses in a barley cross Molecular Breeding. ,vol. 5, pp. 143- 152 ,(1999) , 10.1023/A:1009684108922
Madan Mohan, Suresh Nair, A. Bhagwat, T. G. Krishna, Masahiro Yano, C.R. Bhatia, Takuji Sasaki, Genome mapping, molecular markers and marker-assisted selection in crop plants Molecular Breeding. ,vol. 3, pp. 87- 103 ,(1997) , 10.1023/A:1009651919792
Carlos M. Vicient, Ruslan Kalendar, Kesara Anamthawat-Jónsson, Annu Suoniemi, Alan H. Schulman, Structure, functionality, and evolution of the BARE-1 retrotransposon of barley Genetica. ,vol. 107, pp. 53- 63 ,(1999) , 10.1023/A:1003929913398
Alan H. Schulman, Pushpendra K. Gupta, Rajeev K. Varshney, Organization of retrotransposons and microsatellites in cereal genomes Springer Netherlands. pp. 83- 118 ,(2004) , 10.1007/1-4020-2359-6_4
L Cardle, S degli Ivanissevich, N Marmiroli, M Ganal, M Morgante, A Massari, E Maestri, R Waugh, M Macaulay, W Powell, L Ramsay, K J Edwards, S Tuvesson, T Sjakste, J Fuller, K MacLean, A Simple Sequence Repeat-Based Linkage Map of Barley Genetics. ,vol. 156, pp. 1997- 2005 ,(2000) , 10.1093/GENETICS/156.4.1997
Roger Hull, Hans Will, Molecular biology of viral and nonviral retroelements. Trends in Genetics. ,vol. 5, pp. 357- 359 ,(1989) , 10.1016/0168-9525(89)90151-0
Y. Xu, L. Zhu, J. Xiao, N. Huang, S. R. McCouch, Chromosomal regions associated with segregation distortion of molecular markers in F2 , backcross, doubled haploid, and recombinant inbred populations in rice (Oryza sativa L.) Molecular Genetics and Genomics. ,vol. 253, pp. 535- 545 ,(1997) , 10.1007/S004380050355
A. Kleinhofs, A. Kilian, M. A. Saghai Maroof, R. M. Biyashev, P. Hayes, F. Q. Chen, N. Lapitan, A. Fenwick, T. K. Blake, V. Kanazin, E. Ananiev, L. Dahleen, D. Kudrna, J. Bollinger, S. J. Knapp, B. Liu, M. Sorrells, M. Heun, J. D. Franckowiak, D. Hoffman, R. Skadsen, B. J. Steffenson, A molecular, isozyme and morphological map of the barley (Hordeum vulgare) genome. Theoretical and Applied Genetics. ,vol. 86, pp. 705- 712 ,(1993) , 10.1007/BF00222660
Ruslan Kalendar, Carlos M. Vicient, Ofer Peleg, Kesara Anamthawat-Jonsson, Alexander Bolshoy, Alan H. Schulman, Large retrotransposon derivatives : abundant, conserved but nonautonomous retroelements of barley and related genomes Genetics. ,vol. 166, pp. 1437- 1450 ,(2004) , 10.1534/GENETICS.166.3.1437
E. Igartua, M. Edney, B. G. Rossnagel, D. Spaner, W. G. Legge, G. J. Scoles, P. E. Eckstein, G. A. Penner, N. A. Tinker, K. G. Briggs, D. E. Falk, D. E. Mather, Marker-based selection of QTL affecting grain and malt quality in two-row barley. Crop Science. ,vol. 40, pp. 1426- 1433 ,(2000) , 10.2135/CROPSCI2000.4051426X