Theoretical model of the interaction of glycine with hydrogenated amorphous carbon (HAC).

作者: Vicente Timón , Óscar Gálvez , Belén Maté , Isabel Tanarro , Víctor J. Herrero

DOI: 10.1039/C5CP03938J

关键词:

摘要: A theoretical model of hydrogenated amorphous carbon (HAC) is developed and applied to study the interaction glycine with HAC surfaces at astronomical temperatures. Two models different H content are tried for surface. The theory Density Functional Theory (DFT) level, including a semiempirical dispersion correlation potential, d-DFT or Grimme DFT-D2. level tested on adsorption Si(001) Crystalline also studied in its two stable phases, α β, metastable γ phase. For Si surfaces, molecular introduced neutral zwitterionic forms, most configurations searched. All predictions checked against experimental observations. films prepared by plasma enhanced vapor deposition room temperature. Glycine deposited 20 K into high vacuum, cold temperature chamber, simulate conditions. Adsorption takes place through acidic group COO(-) when several molecules present, they form H-bond chains among them. Comparison between experiments suggests that possible way improve would require introduction aliphatic polycyclic aromatic core. lack previous amino-acids provides motivation this work.

参考文章(59)
Andrzej Wieckowski, Carol Korzeniewski, Björn Braunschweig, Vibrational Spectroscopy at Electrified Interfaces ,(2013)
Stefano Baroni, Stefano de Gironcoli, Andrea Dal Corso, Paolo Giannozzi, Phonons and related crystal properties from density-functional perturbation theory Reviews of Modern Physics. ,vol. 73, pp. 515- 562 ,(2001) , 10.1103/REVMODPHYS.73.515
J. E. Chiar, A. G. G. M. Tielens, A. J. Adamson, A. Ricca, THE STRUCTURE, ORIGIN, AND EVOLUTION OF INTERSTELLAR HYDROCARBON GRAINS The Astrophysical Journal. ,vol. 770, pp. 78- ,(2013) , 10.1088/0004-637X/770/1/78
Inge Loes KATE, James R. C. GARRY, Zan PEETERS, Richard QUINN, Bernard FOING, Pascale EHRENFREUND, Amino acid photostability on the Martian surface Meteoritics & Planetary Science. ,vol. 40, pp. 1185- 1193 ,(2005) , 10.1111/J.1945-5100.2005.TB00183.X
Douglas G. Furton, John W. Laiho, Adolf N. Witt, The Amount of Interstellar Carbon Locked in Solid Hydrogenated Amorphous Carbon The Astrophysical Journal. ,vol. 526, pp. 752- 763 ,(1999) , 10.1086/308016
John P. Perdew, Kieron Burke, Matthias Ernzerhof, Generalized Gradient Approximation Made Simple Physical Review Letters. ,vol. 77, pp. 3865- 3868 ,(1996) , 10.1103/PHYSREVLETT.77.3865
Riet Ramaekers, Joanna Pajak, Bert Lambie, Guido Maes, Neutral and zwitterionic glycine.H2O complexes: A theoretical and matrix-isolation Fourier transform infrared study Journal of Chemical Physics. ,vol. 120, pp. 4182- 4193 ,(2004) , 10.1063/1.1643735
J Robertson, Diamond-like amorphous carbon Materials Science & Engineering R-reports. ,vol. 37, pp. 129- 281 ,(2002) , 10.1016/S0927-796X(02)00005-0