Excavating Y-chromosome haplotype strata in Anatolia

作者: Cengiz Cinnioglu , Roy King , Toomas Kivisild , Ersi Kalfoglu , Sevil Atasoy

DOI: 10.1007/S00439-003-1031-4

关键词:

摘要: Analysis of 89 biallelic polymorphisms in 523 Turkish Y chromosomes revealed 52 distinct haplotypes with considerable haplogroup substructure, as exemplified by their respective levels accumulated diversity at ten short tandem repeat (STR) loci. The major components (haplogroups E3b, G, J, I, L, N, K2, and R1; 94.1%) are shared European neighboring Near Eastern populations contrast only a minor share haplogroups related to Central Asian (C, Q O; 3.4%), Indian (H, R2; 1.5%) African (A, E3*, E3a; 1%) affinity. expansion times for 20 assemblages was estimated from associated STR diversity. This comprehensive characterization Y-chromosome heritage addresses many multifaceted aspects Anatolian prehistory, including: (1) the most frequent haplogroup, splits into two sub-clades, one which (J2) shows decreasing variances increasing latitude, compatible northward expansion; (2) G1 L show affinities south Caucasus geographic distribution well motifs; (3) frequency originated Europe, declines longitude, indicating gene flow arriving Europe; (4) conversely, G2 radiates towards (5) E3b3 displays latitudinal correlation northward; (6) R1b3 emanates Turkey Southeast Europe Caucasia and; (7) high resolution SNP analysis provides evidence detectable yet weak signal (<9%) recent paternal Asia. variety is witness being both an important source recipient flow.

参考文章(64)
T. Y C. Consortium, A nomenclature system for the tree of human Y-chromosomal binary haplogroups Genome Research. ,vol. 12, pp. 339- 348 ,(2002) , 10.1101/GR.217602
Peter A. Underhill, Peidong Shen, Alice A. Lin, Li Jin, Giuseppe Passarino, Wei H. Yang, Erin Kauffman, Batsheva Bonné-Tamir, Jaume Bertranpetit, Paolo Francalacci, Muntaser Ibrahim, Trefor Jenkins, Judith R. Kidd, S. Qasim Mehdi, Mark T. Seielstad, R. Spencer Wells, Alberto Piazza, Ronald W. Davis, Marcus W. Feldman, L. Luca Cavalli-Sforza, Peter. J. Oefner, Y chromosome sequence variation and the history of human populations Nature Genetics. ,vol. 26, pp. 358- 361 ,(2000) , 10.1038/81685
Bing Yu, Nicole A. Sawyer, Christine Chiu, Peter J. Oefner, Peter A. Underhill, DNA mutation detection using denaturing high-performance liquid chromatography (DHPLC). Current protocols in human genetics. ,vol. 48, pp. 1- 14 ,(1998) , 10.1002/0471142905.HG0710S48
Nicholas C Dracopoli, Jonathan L Haines, Bruce R Korf, Current protocols in human genetics Wiley. ,(1994)
David J. Balding, Ian J. Wilson, Ian J. Wilson, Genealogical Inference From Microsatellite Data Genetics. ,vol. 150, pp. 499- 510 ,(1998) , 10.1093/GENETICS/150.1.499
A. S. SANTACHIARA BENERECETTI, O. SEMINO, G. PASSARINO, A. TORRONI, R. BRDICKA, M. FELLOUS, G. MODIANO, The common, Near‐Eastern origin of Ashkenazi and Sephardi Jews supported by Y‐chromosome similarity Annals of Human Genetics. ,vol. 57, pp. 55- 64 ,(1993) , 10.1111/J.1469-1809.1993.TB00886.X
A. Caglià, D. Corach, N. Fretwell, C. Gehrig, G. Graziosi, F. Heidorn, S. Herrmann, B. Herzog, M. Hidding, K. Honda, M. Jobling, M. Krawczak, K. Leim, S. Meuser, E. Meyer, W. Oesterreich, A. Pandya, W. Parson, G. Penacino, A. Perez-Lezaun, A. Piccinini, M. Prinz, C. Schmitt, P. M. Schneider, R. Szibor, J. Teifel-Greding, G. Weichhold, P. de Knijff, L. Roewer, M. Kayser, Evaluation of Y-chromosomal STRs: a multicenter study International Journal of Legal Medicine. ,vol. 110, pp. 125- 133 ,(1997) , 10.1007/S004140050051
Ornella Semino, Giuseppe Passarino, Lluís Quintana-Murci, Aiping Liu, Judit Béres, Andreas Czeizel, A Silvana Santachiara-Benerecetti, MtDNA and Y chromosome polymorphisms in Hungary: inferences from the palaeolithic, neolithic and Uralic influences on the modern Hungarian gene pool. European Journal of Human Genetics. ,vol. 8, pp. 339- 346 ,(2000) , 10.1038/SJ.EJHG.5200468
Giuseppe Passarino, Ornella Semino, Chiara Magri, Nadia Al-Zahery, Giorgia Benuzzi, Lluis Quintana-Murci, Slmun Andellnovic, Floriana Bullc-Jakus, Aiping Liu, Ahmet Arslan, A.Silvana Santachiara-Benerecetti, The 49a,f haplotype 11 is a new marker of the EU19 lineage that traces migrations from northern regions of the black sea Human Immunology. ,vol. 62, pp. 922- 932 ,(2001) , 10.1016/S0198-8859(01)00291-9