NMR and crystallographic structural studies of the extremely stable monomeric variant of human cystatin C with single amino acid substitution.

作者: Martyna Maszota‐Zieleniak , Przemyslaw Jurczak , Marta Orlikowska , Igor Zhukov , Dominika Borek

DOI: 10.1111/FEBS.15010

关键词:

摘要: Human cystatin C (hCC), a member of the superfamily papain-like cysteine protease inhibitors, is most widespread in human body fluids. This small protein, addition to its physiological function, involved various diseases, including cerebral amyloid angiopathy, hemorrhage, stroke, and dementia. Physiologically active hCC monomer. However, all structural studies based on crystallization led dimeric structure formed as result three-dimensional exchange protein domains (3D domain swapping). The monomeric was obtained only for variant V57N stabilized by an additional disulfide bridge. With this study, we extend number models with single amino acid substitution flexible loop L1. V57G chosen X-ray NMR analysis due exceptional conformational stability solution. In work, show first time dynamics We were also able compare these data crystal other cystatins. overall fold retained solute form. Additionally, information concerning N terminus during our presented time. DATABASE: Crystallographic structure: are available PDB databases under accession 6ROA. BMRB numbers 6RPV 34399, respectively.

参考文章(64)
Anders O. Grubb, Cystatin C--properties and use as diagnostic marker. Advances in Clinical Chemistry. ,vol. 35, pp. 63- 99 ,(2000) , 10.1016/S0065-2423(01)35015-1
Eva Žerovnik, Veronika Stoka, Andreja Mirtič, Gregor Gunčar, Jože Grdadolnik, Rosemary A. Staniforth, Dušan Turk, Vito Turk, Mechanisms of amyloid fibril formation--focus on domain-swapping. FEBS Journal. ,vol. 278, pp. 2263- 2282 ,(2011) , 10.1111/J.1742-4658.2011.08149.X
Richard A. Engh, Thorsten Dieckmann, Wolfram Bode, Ennes A. Auerswald, Vito Turk, Robert Huber, Hartmut Oschkinat, Conformational Variability of Chicken Cystatin: Comparison of Structures Determined by X-ray Diffraction and NMR Spectroscopy Journal of Molecular Biology. ,vol. 234, pp. 1060- 1069 ,(1993) , 10.1006/JMBI.1993.1659
Harold C. Neu, Leon A. Heppel, The release of enzymes from Escherichia coli by osmotic shock and during the formation of spheroplasts. Journal of Biological Chemistry. ,vol. 240, pp. 3685- 3692 ,(1965) , 10.1016/S0021-9258(18)97200-5
Zbyszek Otwinowski, Wladek Minor, Processing of X-ray diffraction data collected in oscillation mode Methods in Enzymology. ,vol. 276, pp. 307- 326 ,(1997) , 10.1016/S0076-6879(97)76066-X
M Abrahamson, A Ritonja, M A Brown, A Grubb, W Machleidt, A J Barrett, Identification of the probable inhibitory reactive sites of the cysteine proteinase inhibitors human cystatin C and chicken cystatin. Journal of Biological Chemistry. ,vol. 262, pp. 9688- 9694 ,(1987) , 10.1016/S0021-9258(18)47989-6
Robert Janowski, Maciej Kozak, Elzbieta Jankowska, Zbigniew Grzonka, Anders Grubb, Magnus Abrahamson, Mariusz Jaskolski, Human cystatin C, an amyloidogenic protein, dimerizes through three-dimensional domain swapping. Nature Structural & Molecular Biology. ,vol. 8, pp. 316- 320 ,(2001) , 10.1038/86188
David Fushman, Determination of Protein Dynamics Using 15N Relaxation Measurements Protein Science Encyclopedia. pp. 283- 308 ,(2008) , 10.1002/9783527610754.SA04
Nobuhisa Shimba, Eri Kariya, Shin-ichi Tate, Hiroyuki Kaji, Masatsune Kainosho, Structural comparison between wild-type and P25S human cystatin A by NMR spectroscopy. Does this mutation affect the a-helix conformation ? Journal of Structural and Functional Genomics. ,vol. 1, pp. 26- 42 ,(2000) , 10.1023/A:1011380315619
M Abrahamson, R W Mason, H Hansson, D J Buttle, A Grubb, K Ohlsson, Human cystatin C. role of the N-terminal segment in the inhibition of human cysteine proteinases and in its inactivation by leucocyte elastase Biochemical Journal. ,vol. 273, pp. 621- 626 ,(1991) , 10.1042/BJ2730621