Selective and sensitive fluorescence "turn-on" detection of 4-thiouridine in nucleic acids via oxidative amination.

作者: Jingyi Wang , Jiachen Shang , Zichen Qin , Aijun Tong , Yu Xiang

DOI: 10.1039/C9CC06312A

关键词:

摘要: A fluorescence "turn-on" method for digestion-free analysis of 4-thiouridine (s4U) in nucleic acids was developed this work based on the oxidative amination s4U by fluoresceinamine (FAM-NH2) and periodate (IO4-). It 125-fold more sensitive detection than traditional UV330 absorption method, showed excellent selectivity to over 2-thiouridine (s2U) analogues biological thiols.

参考文章(29)
Yuchen Liu, Xiang Zhu, Akiyoshi Nakamura, Ron Orlando, Dieter Söll, William B Whitman, None, Biosynthesis of 4-thiouridine in tRNA in the methanogenic archaeon Methanococcus maripaludis Journal of Biological Chemistry. ,vol. 287, pp. 36683- 36692 ,(2012) , 10.1074/JBC.M112.405688
Alain Favre, Eliane Hajnsdorf, Khoudia Thiam, Adriano Caldeira de Araujo, Mutagenesis and growth delay induced in Escherichia coli by near-ultraviolet radiations Biochimie. ,vol. 67, pp. 335- 342 ,(1985) , 10.1016/S0300-9084(85)80076-6
Edward B. Ziff, Jacques R. Fresco, Chemical transformation of 4-thiouracil nucleosides to uracil and cytosine counterparts. Journal of the American Chemical Society. ,vol. 90, pp. 7338- 7342 ,(1968) , 10.1021/JA01028A027
Leighton J. Core, Joshua J. Waterfall, John T. Lis, Nascent RNA Sequencing Reveals Widespread Pausing and Divergent Initiation at Human Promoters Science. ,vol. 322, pp. 1845- 1848 ,(2008) , 10.1126/SCIENCE.1162228
Oscar J. Oppezzo, Ramón A. Pizarro, Transient reduction in the tRNA 4-thiouridine content induced by ultraviolet A during post-irradiation growth in Enterobacter cloacae Journal of Photochemistry and Photobiology B-biology. ,vol. 66, pp. 207- 212 ,(2002) , 10.1016/S1011-1344(02)00272-5
Eugene G. Mueller, Peter M. Palenchar, Christopher J. Buck, The Role of the Cysteine Residues of ThiI in the Generation of 4-Thiouridine in tRNA Journal of Biological Chemistry. ,vol. 276, pp. 33588- 33595 ,(2001) , 10.1074/JBC.M104067200
Elzbieta Sochacka, Paulina Bartos, Karina Kraszewska, Barbara Nawrot, Desulfuration of 2-thiouridine with hydrogen peroxide in the physiological pH range 6.6–7.6 is pH-dependent and results in two distinct products Bioorganic & Medicinal Chemistry Letters. ,vol. 23, pp. 5803- 5805 ,(2013) , 10.1016/J.BMCL.2013.08.114
Dan Su, Clement T Y Chan, Chen Gu, Kok Seong Lim, Yok Hian Chionh, Megan E McBee, Brandon S Russell, I Ramesh Babu, Thomas J Begley, Peter C Dedon, Quantitative analysis of ribonucleoside modifications in tRNA by HPLC-coupled mass spectrometry Nature Protocols. ,vol. 9, pp. 828- 841 ,(2014) , 10.1038/NPROT.2014.047