Novel Chemical Space Exploration via Natural Products

作者: Josefin Rosén , Johan Gottfries , Sorel Muresan , Anders Backlund , Tudor I. Oprea

DOI: 10.1021/JM801514W

关键词:

摘要: Natural products (NPs) are a rich source of novel compound classes and new drugs. In the present study we have used chemical space navigation tool ChemGPS-NP to evaluate occupancy by NPs bioactive medicinal chemistry compounds from database WOMBAT. The two sets differ notably in coverage space, tangible leadlike were found cover regions that lack representation Property based similarity calculations performed identify NP neighbors approved Several revealed this method confirmed exhibit same activity as their drug neighbors. identification leads starting point may prove useful strategy for discovery search with unique properties.

参考文章(40)
Sandip B. Bharate, Inder Pal Singh, K. K. Bhutani, Anti-HIV natural products Current Science. ,vol. 89, pp. 269- 290 ,(2005)
Marius Olah, Maria Mracec, Liliana Ostopovici, Ramona Rad, Alina Bora, Nicoleta Hadaruga, Ionela Olah, Magdalena Banda, Zeno Simon, Mircea Mracec, Tudor I. Oprea, WOMBAT: World of Molecular Bioactivity John Wiley & Sons, Ltd. pp. 221- 239 ,(2005) , 10.1002/3527603743.CH9
Peter Ertl, Ansgar Schuffenhauer, Cheminformatics analysis of natural products: lessons from nature inspiring the design of new drugs. Progress in drug research. ,vol. 66, pp. 217- 235 ,(2008) , 10.1007/978-3-7643-8595-8_4
L A Wheeler, G Sachs, G De Vries, D Goodrum, E Woldemussie, S Muallem, Manoalide, a natural sesterterpenoid that inhibits calcium channels. Journal of Biological Chemistry. ,vol. 262, pp. 6531- 6538 ,(1987) , 10.1016/S0021-9258(18)48274-9
Gerald M. Maggiora, Mark A. Johnson, Concepts and applications of molecular similarity Wiley. ,(1990)
Alfredo Flury, Javier G. Blanco, Roberto R. Gil, José L. Bocco, Tamara L. Meragelman, Susana Genti-Raimondi, Aromatase Inhibition by an 11,13-Dihydroderivative of a Sesquiterpene Lactone Journal of Pharmacology and Experimental Therapeutics. ,vol. 297, pp. 1099- 1105 ,(2001)
Ji-Sang Hwang, Seon A Lee, Seong Su Hong, Kyong Soon Lee, Myung Koo Lee, Bang Yeon Hwang, Jai Seup Ro, Monoamine oxidase inhibitory components from the roots of Sophora flavescens. Archives of Pharmacal Research. ,vol. 28, pp. 190- 194 ,(2005) , 10.1007/BF02977714
Ronald J. Quinn, Anthony R. Carroll, Ngoc B. Pham, Paul Baron, Meredith E. Palframan, Lekha Suraweera, Gregory K. Pierens, Sorel Muresan, Developing a drug-like natural product library. Journal of Natural Products. ,vol. 71, pp. 464- 468 ,(2008) , 10.1021/NP070526Y
Michael J. Wester, Sara N. Pollock, Evangelos A. Coutsias, Tharun Kumar Allu, Sorel Muresan, Tudor I. Oprea, Scaffold topologies. 2. Analysis of chemical databases. Journal of Chemical Information and Modeling. ,vol. 48, pp. 1311- 1324 ,(2008) , 10.1021/CI700342H