Exploring the Composition and Functions of Plastic Microbiome Using Whole-Genome Sequencing.

作者: Ian Grainge , Wayne O'Connor , Rob Knight , Suresh Subashchandrabose , Geetika Bhagwat

DOI: 10.1021/ACS.EST.0C07952

关键词:

摘要: Besides the ecotoxicological consequences of microplastics and associated chemicals, association microbes on plastics has greater environmental implications as may select for unique microbiome participating in environmentally significant functions. Despite this, functional potential with different types is understudied. Here, we investigate interaction between plastic marine biofilm-forming microorganisms through a whole-genome sequencing approach four incubated environment. Taxonomic analysis suggested that microplastic surfaces exhibit microbial profiles niche partitioning among substrates. In particular, abundance Vibrio alginolyticus campbellii pollution pose risk to food chain negatively impact aquaculture industries. Microbial genera involved xenobiotic compound degradation, carbon cycling, genes type IV secretion system, conjugal transfer protein TraG, plant-pathogen interaction, CusA/CzcA family heavy metal efflux proteins, TolC proteins were significantly enriched all substrates, indicating variety processes operated by plastic-microbiome. The present study gives detailed characterization rapidly altering composition gene pools adds new knowledge surrounding ramifications pollution.

参考文章(114)
J. Roger Bray, J. T. Curtis, An Ordination of the Upland Forest Communities of Southern Wisconsin Ecological Monographs. ,vol. 27, pp. 325- 349 ,(1957) , 10.2307/1942268
Carlos Pedrós-Alió, Beatriz Fernández-Gómez, Michael Richter, Margarete Schüler, Jarone Pinhassi, Antoni Fernàndez-Guerra, Emilio O Casamayor, Silvia G Acinas, José M González, Ecology of marine Bacteroidetes: a comparative genomics approach The ISME Journal. ,vol. 7, pp. 1026- 1037 ,(2013) , 10.1038/ISMEJ.2012.169
Daniel Wicke, Uta Böckelmann, Thorsten Reemtsma, Experimental and modeling approach to study sorption of dissolved hydrophobic organic contaminants to microbial biofilms. Water Research. ,vol. 41, pp. 2202- 2210 ,(2007) , 10.1016/J.WATRES.2007.01.039
Cecilia M. Santegoeds, Timothy G. Ferdelman, Gerard Muyzer, Dirk de Beer, Structural and functional dynamics of sulfate-reducing populations in bacterial biofilms Applied and Environmental Microbiology. ,vol. 64, pp. 3731- 3739 ,(1998) , 10.1128/AEM.64.10.3731-3739.1998
Anthony L. Andrady, Microplastics in the marine environment Marine Pollution Bulletin. ,vol. 62, pp. 1596- 1605 ,(2011) , 10.1016/J.MARPOLBUL.2011.05.030
Daniel P. Faith, Conservation evaluation and phylogenetic diversity Biological Conservation. ,vol. 61, pp. 1- 10 ,(1992) , 10.1016/0006-3207(92)91201-3
José L. Balcázar, Jéssica Subirats, Carles M. Borrego, The role of biofilms as environmental reservoirs of antibiotic resistance Frontiers in Microbiology. ,vol. 6, pp. 1216- 1216 ,(2015) , 10.3389/FMICB.2015.01216
Linda A Amaral-Zettler, Erik R Zettler, Beth Slikas, Gregory D Boyd, Donald W Melvin, Clare E Morrall, Giora Proskurowski, Tracy J Mincer, The biogeography of the Plastisphere: implications for policy Frontiers in Ecology and the Environment. ,vol. 13, pp. 541- 546 ,(2015) , 10.1890/150017
Nam Ngoc Phuong, Aurore Zalouk-Vergnoux, Laurence Poirier, Abderrahmane Kamari, Amélie Châtel, Catherine Mouneyrac, Fabienne Lagarde, Is there any consistency between the microplastics found in the field and those used in laboratory experiments Environmental Pollution. ,vol. 211, pp. 111- 123 ,(2016) , 10.1016/J.ENVPOL.2015.12.035
Katelyn C. Jelden, Shawn G. Gibbs, Philip W. Smith, Angela L. Hewlett, Peter C. Iwen, Kendra K. Schmid, John J. Lowe, Comparison of hospital room surface disinfection using a novel ultraviolet germicidal irradiation (UVGI) generator Journal of Occupational and Environmental Hygiene. ,vol. 13, pp. 690- 698 ,(2016) , 10.1080/15459624.2016.1166369