A Matter of Scale and Dimensions: Chromatin of Chromosome Landmarks in the Fungi

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DOI: 10.1128/MICROBIOLSPEC.FUNK-0054-2017

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摘要: Chromatin and chromosomes of fungi are highly diverse dynamic, even within species. Much what we know about histone modification enzymes, RNA interference, DNA methylation, cell cycle control was first addressed in Saccharomyces cerevisiae, Schizosaccharomyces pombe, Aspergillus nidulans, Neurospora crassa. Here, examine the three landmark regions that required for maintenance stable their faithful inheritance, namely, origins replication, telomeres centromeres. We summarize state recent chromatin research explains is normal function these specialized chromosomal different fungi, with an emphasis on silencing mechanism associated subtelomeric regions, initiated by sirtuin deacetylases H3 lysine 27 (H3K27) methyltransferases. explore mechanisms appearance "accessory" or "conditionally dispensable" contrast has been learned from studies genome-wide chromosome conformation capture S. N. crassa, Trichoderma reesei. While most current knowledge based work a handful genetically biochemically tractable model organisms, suggest where major gaps remain to be closed. Fungi will continue serve as facile organisms uncover basic processes life because they make excellent genetics, biochemistry, biology, evolutionary biology.

参考文章(261)
Junko Kanoh, Mahito Sadaie, Takeshi Urano, Fuyuki Ishikawa, Telomere Binding Protein Taz1 Establishes Swi6 Heterochromatin Independently of RNAi at Telomeres Current Biology. ,vol. 15, pp. 1808- 1819 ,(2005) , 10.1016/J.CUB.2005.09.041
Raphael Margueron, Neil Justin, Katsuhito Ohno, Miriam L. Sharpe, Jinsook Son, William J. Drury III, Philipp Voigt, Stephen R. Martin, William R. Taylor, Valeria De Marco, Vincenzo Pirrotta, Danny Reinberg, Steven J. Gamblin, Role of the polycomb protein EED in the propagation of repressive histone marks Nature. ,vol. 461, pp. 762- 767 ,(2009) , 10.1038/NATURE08398
Tatsuo Fukagawa, William C. Earnshaw, The centromere: chromatin foundation for the kinetochore machinery. Developmental Cell. ,vol. 30, pp. 496- 508 ,(2014) , 10.1016/J.DEVCEL.2014.08.016
V. Miao, S. Covert, H. VanEtten, A fungal gene for antibiotic resistance on a dispensable ("B") chromosome. Science. ,vol. 254, pp. 1773- 1776 ,(1991) , 10.1126/SCIENCE.1763326
A. Zemach, I. E. McDaniel, P. Silva, D. Zilberman, Genome-Wide Evolutionary Analysis of Eukaryotic DNA Methylation Science. ,vol. 328, pp. 916- 919 ,(2010) , 10.1126/SCIENCE.1186366
Jessica L. Soyer, Mennat El Ghalid, Nicolas Glaser, Bénédicte Ollivier, Juliette Linglin, Jonathan Grandaubert, Marie-Hélène Balesdent, Lanelle R. Connolly, Michael Freitag, Thierry Rouxel, Isabelle Fudal, Epigenetic Control of Effector Gene Expression in the Plant Pathogenic Fungus Leptosphaeria maculans PLoS Genetics. ,vol. 10, pp. e1004227- ,(2014) , 10.1371/JOURNAL.PGEN.1004227
Julie A. Law, Steven E. Jacobsen, Establishing, maintaining and modifying DNA methylation patterns in plants and animals Nature Reviews Genetics. ,vol. 11, pp. 204- 220 ,(2010) , 10.1038/NRG2719
D. K. Palmer, K. O'Day, H. L. Trong, H. Charbonneau, R. L. Margolis, Purification of the centromere-specific protein CENP-A and demonstration that it is a distinctive histone. Proceedings of the National Academy of Sciences of the United States of America. ,vol. 88, pp. 3734- 3738 ,(1991) , 10.1073/PNAS.88.9.3734
Laura S. Burrack, Judith Berman, Neocentromeres and epigenetically inherited features of centromeres. Chromosome Research. ,vol. 20, pp. 607- 619 ,(2012) , 10.1007/S10577-012-9296-X