Molecular Indicators Used in the Development of Predictive Models for Microbial Source Tracking

作者: Elisenda Ballesté , Xavier Bonjoch , Lluís A. Belanche , Anicet R. Blanch

DOI: 10.1128/AEM.02350-09

关键词:

摘要: A number of chemical, microbial, and eukaryotic indicators have been proposed as fecal pollution sources in water bodies. No single one the tested to date has able determine source water. However, combined use different demonstrated be best way defining predictive models suitable for determining sources. Molecular methods are promising tools that could complement standard microbiological analysis. In this study, feasibility some molecular microbial tracking (MST) was compared (names markers parentheses): host-specific Bacteroidetes (HF134, HF183, CF128, CF193), Bifidobacterium adolescentis (ADO), dentium (DEN), gene esp Enterococcus faecium, mitochondrial DNA associated with humans, cattle, pigs (Humito, Bomito, Pomito, respectively). None individual enabled 100% identification. They should other raise sensitivity specificity increase identified. MST using only these were developed. The evaluated by considering lowest needed obtain highest rate identification three (ADO, Pomito) correct 75.7% samples, differentiation between human, swine, bovine, poultry Discrimination human nonhuman possible two markers: ADO Pomito (84.6% identification). percentage increased analyzed. model distinguishing from based on 5 ADO, DEN, provided 90.1% classification.

参考文章(61)
Katharine G. Field, Eunice C. Chern, Linda K. Dick, Jed Fuhrman, John Griffith, Patricia A. Holden, Michael G. LaMontagne, Betty Olson, Michael T. Simonich, A comparative study of culture-independent, library-independent genotypic methods of fecal source tracking. Journal of Water and Health. ,vol. 1, pp. 181- 194 ,(2003) , 10.2166/WH.2003.0020
Francisco Lucena Gutiérrez, Joan Jofre i Torroella, Andrey Payán González, Anicet Blanch i Gisbert, Minimal requirements for parameters to be used for the development of predictive models for microbial source tracking. The example of the pair somatic coliphages and phages infecting Bacteroides Susan Allender-Hagedorn. ,(2008)
B. Gilpin, T. James, F. Nourozi, D. Saunders, P. Scholes, M. Savill, The use of chemical and molecular microbial indicators for faecal source identification. Water Science and Technology. ,vol. 47, pp. 39- 43 ,(2003) , 10.2166/WST.2003.0155
John F. Griffith, Stephen B. Weisberg, Charles D. McGee, Evaluation of microbial source tracking methods using mixed fecal sources in aqueous test samples. Journal of Water and Health. ,vol. 1, pp. 141- 151 ,(2003) , 10.2166/WH.2003.0017
F. GAVINI, V. DELCENSERIE, K. KOPEINIG, S. POLLINGER, H. BEERENS, C. BONAPARTE, M. UPMANN, Bifidobacterium species isolated from animal feces and from beef and pork meat. Journal of Food Protection. ,vol. 69, pp. 871- 877 ,(2006) , 10.4315/0362-028X-69.4.871
H. G. H. J. Heilig, A. D. L. Akkermans, F. Schut, E. E. Vaughan, E. G. Zoetendal, W. M. de Vos, A molecular view of the intestinal ecosystem. Current Issues in Intestinal Microbiology. ,vol. 1, pp. 1- 12 ,(2000)
L Fiksdal, J S Maki, S J LaCroix, J T Staley, Survival and detection of Bacteroides spp., prospective indicator bacteria. Applied and Environmental Microbiology. ,vol. 49, pp. 148- 150 ,(1985) , 10.1128/AEM.49.1.148-150.1985
I G Resnick, M A Levin, Assessment of bifidobacteria as indicators of human fecal pollution. Applied and Environmental Microbiology. ,vol. 42, pp. 433- 438 ,(1981) , 10.1128/AEM.42.3.433-438.1981
Regina Lamendella, Jorge W. Santo Domingo, Daniel B. Oerther, Jason R. Vogel, Donald M. Stoeckel, Assessment of fecal pollution sources in a small northern-plains watershed using PCR and phylogenetic analyses of Bacteroidetes 16S rRNA gene. FEMS Microbiology Ecology. ,vol. 59, pp. 651- 660 ,(2007) , 10.1111/J.1574-6941.2006.00211.X
Yolanda Nebra, Xavier Bonjoch, Anicet R. Blanch, Use of Bifidobacterium dentium as an Indicator of the Origin of Fecal Water Pollution Applied and Environmental Microbiology. ,vol. 69, pp. 2651- 2656 ,(2003) , 10.1128/AEM.69.5.2651-2656.2003