Capturing protein-coding genes across highly divergent species
作者： Chenhong Li , Michael Hofreiter , Nicolas Straube , Shannon Corrigan , Gavin J.P. Naylor
DOI: 10.2144/000114039
关键词:
摘要: … We targeted coding DNA sequences (CDS) from single-copy protein-coding genes that are shared across gnathostome vertebrates. We compared the published and annotated …
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biotechniques.com 参考文章(31)
F Delsuc, EJP Douzery, B Hedges, S Kumar, None, The timetree of life Oxford University Press. ,(2009)
CHENHONG LI, JEAN‐JACK M. RIETHOVEN, GAVIN J. P. NAYLOR, EvolMarkers: a database for mining exon and intron markers for evolution, ecology and conservation studies. Molecular Ecology Resources. ,vol. 12, pp. 967- 971 ,(2012) , 10.1111/J.1755-0998.2012.03167.X
J. T. Simpson, K. Wong, S. D. Jackman, J. E. Schein, S. J.M. Jones, I. Birol, ABySS: A parallel assembler for short read sequence data Genome Research. ,vol. 19, pp. 1117- 1123 ,(2009) , 10.1101/GR.089532.108
Michael Hofreiter, Torsten Schöneberg, The genetic and evolutionary basis of colour variation in vertebrates. Cellular and Molecular Life Sciences. ,vol. 67, pp. 2591- 2603 ,(2010) , 10.1007/S00018-010-0333-7
Sarah B. Ng, Emily H. Turner, Peggy D. Robertson, Steven D. Flygare, Abigail W. Bigham, Choli Lee, Tristan Shaffer, Michelle Wong, Arindam Bhattacharjee, Evan E. Eichler, Michael Bamshad, Deborah A. Nickerson, Jay Shendure, Targeted capture and massively parallel sequencing of 12 human exomes Nature. ,vol. 461, pp. 272- 276 ,(2009) , 10.1038/NATURE08250
Patrick Sulem, Daniel F Gudbjartsson, Simon N Stacey, Agnar Helgason, Thorunn Rafnar, Margret Jakobsdottir, Stacy Steinberg, Sigurjon A Gudjonsson, Arnar Palsson, Gudmar Thorleifsson, Snæbjörn Pálsson, Bardur Sigurgeirsson, Kristin Thorisdottir, Rafn Ragnarsson, Kristrun R Benediktsdottir, Katja K Aben, Sita H Vermeulen, Alisa M Goldstein, Margaret A Tucker, Lambertus A Kiemeney, Jon H Olafsson, Jeffrey Gulcher, Augustine Kong, Unnur Thorsteinsdottir, Kari Stefansson, Two newly identified genetic determinants of pigmentation in Europeans. Nature Genetics. ,vol. 40, pp. 835- 837 ,(2008) , 10.1038/NG.160
Ted Cosart, Albano Beja-Pereira, Shanyuan Chen, Sarah B Ng, Jay Shendure, Gordon Luikart, None, Exome-wide DNA capture and next generation sequencing in domestic and wild species. BMC Genomics. ,vol. 12, pp. 347- 347 ,(2011) , 10.1186/1471-2164-12-347
J. G. Inoue, M. Miya, K. Lam, B.-H. Tay, J. A. Danks, J. Bell, T. I. Walker, B. Venkatesh, Evolutionary Origin and Phylogeny of the Modern Holocephalans (Chondrichthyes: Chimaeriformes): A Mitogenomic Perspective Molecular Biology and Evolution. ,vol. 27, pp. 2576- 2586 ,(2010) , 10.1093/MOLBEV/MSQ147
V. C. Mason, G. Li, K. M. Helgen, W. J. Murphy, Efficient cross-species capture hybridization and next-generation sequencing of mitochondrial genomes from noninvasively sampled museum specimens Genome Research. ,vol. 21, pp. 1695- 1704 ,(2011) , 10.1101/GR.120196.111
S. Kalujnaia, I.S. McWilliam, V.A. Zaguinaiko, A.L. Feilen, J. Nicholson, N. Hazon, C.P. Cutler, R.J. Balment, A.R. Cossins, M. Hughes, G. Cramb, Salinity adaptation and gene profiling analysis in the European eel (Anguilla anguilla) using microarray technology. General and Comparative Endocrinology. ,vol. 152, pp. 274- 280 ,(2007) , 10.1016/J.YGCEN.2006.12.025