Suppression of intragenic transcription requires the MOT1 and NC2 regulators of TATA-binding protein

作者: Maria JE Koster , Asli D Yildirim , P Anthony Weil , Frank CP Holstege , H Th Marc Timmers

DOI: 10.1093/NAR/GKT1398

关键词:

摘要: Chromatin structure in transcribed regions poses a barrier for intragenic transcription. In comprehensive study of the yeast chromatin remodelers and Mot1p-NC2 regulators TATA-binding protein (TBP), we detected synthetic genetic interactions indicative suppression Conditional depletion Mot1p or NC2 absence ISW1 remodeler, but not other remodelers, activated cryptic FLO8 promoter. Likewise, conditional deletion backgrounds H3K36 methyltransferase Set2p Asf1p-Rtt106p histone H3-H4 chaperones, important factors involved maintaining repressive environment, resulted increased transcripts. Activity promoter is associated with reduced H3 levels, TBP binding tri-methylation H3K4 independent Spt-Ada-Gcn5-acetyltransferase function. These data reveal cooperation negative regulation specific to inhibit

参考文章(53)
B C Laurent, X Yang, M Carlson, An essential Saccharomyces cerevisiae gene homologous to SNF2 encodes a helicase-related protein in a new family. Molecular and Cellular Biology. ,vol. 12, pp. 1893- 1902 ,(1992) , 10.1128/MCB.12.4.1893
Klaas W Mulder, G Sebastiaan Winkler, H Th Marc Timmers, DNA damage and replication stress induced transcription of RNR genes is dependent on the Ccr4–Not complex Nucleic Acids Research. ,vol. 33, pp. 6384- 6392 ,(2005) , 10.1093/NAR/GKI938
Ho Sung Rhee, B. Franklin Pugh, Genome-wide structure and organization of eukaryotic pre-initiation complexes Nature. ,vol. 483, pp. 295- 301 ,(2012) , 10.1038/NATURE10799
Russell P. Darst, Arindam Dasgupta, Chunming Zhu, Jer-Yuan Hsu, Amy Vroom, Tamara Muldrow, David T. Auble, Mot1 Regulates the DNA Binding Activity of Free TATA-binding Protein in an ATP-dependent Manner Journal of Biological Chemistry. ,vol. 278, pp. 13216- 13226 ,(2003) , 10.1074/JBC.M211445200
Andrea C. Silva, Xiaomeng Xu, Hyun-Soo Kim, Jeffrey Fillingham, Thomas Kislinger, Thomas A. Mennella, Michael-Christopher Keogh, The replication-independent histone H3-H4 chaperones HIR, ASF1, and RTT106 co-operate to maintain promoter fidelity. Journal of Biological Chemistry. ,vol. 287, pp. 1709- 1718 ,(2012) , 10.1074/JBC.M111.316489
Andrew Seeber, Michael Hauer, Susan M Gasser, Nucleosome remodelers in double-strand break repair Current Opinion in Genetics & Development. ,vol. 23, pp. 174- 184 ,(2013) , 10.1016/J.GDE.2012.12.008
Andrew D Basehoar, Sara J Zanton, B.Franklin Pugh, Identification and Distinct Regulation of Yeast TATA Box-Containing Genes Cell. ,vol. 116, pp. 699- 709 ,(2004) , 10.1016/S0092-8674(04)00205-3
N. C. Tolga Emre, Stuart L. Schreiber, Jane Mellor, Tony Kouzarides, Helena Santos-Rosa, Robert Schneider, Andrew J. Bannister, Julia Sherriff, Bradley E. Bernstein, Active genes are tri-methylated at K4 of histone H3 Nature. ,vol. 419, pp. 407- 411 ,(2002) , 10.1038/NATURE01080
K. Struhl, D. T. Stinchcomb, S. Scherer, R. W. Davis, High-frequency transformation of yeast: autonomous replication of hybrid DNA molecules Proceedings of the National Academy of Sciences of the United States of America. ,vol. 76, pp. 1035- 1039 ,(1979) , 10.1073/PNAS.76.3.1035