A gene expression signature distinguishes normal tissues of sporadic and radiation-induced papillary thyroid carcinomas.

作者: Geneviève Dom , Maxime Tarabichi , K Unger , G Thomas , M Oczko-Wojciechowska

DOI: 10.1038/BJC.2012.302

关键词:

摘要: Papillary thyroid cancer (PTC) incidence increased dramatically in children after the Chernobyl accident, providing a unique opportunity to investigate molecular features of radiation-induced cancer. In contrast previous studies that included age-related confounding factors, we investigated mRNA expression PTC and normal contralateral tissues patients exposed non-exposed fallout, using age- ethnicity-matched non-irradiated cohorts. Forty-five were analysed by full-genome microarrays. Twenty-two have been fallout; 23 others age-matched resident same regions Ukraine, but born 1 March 1987, is, not 131I. A gene signature 793 probes corresponding 403 genes permitted differentiation between from those who radiation was identified. The differences confirmed quantitative RT-PCR. Many deregulated pathways are related cell proliferation. Our results suggest higher proliferation rate could be either as predisposition or consequence radiation. allows identification cancers.

参考文章(43)
Matthew Wiener, Andy Liaw, Classification and Regression by randomForest ,(2007)
Markus Ruschhaupt, Wolfgang Huber, Annemarie Poustka, Ulrich Mansmann, A Compendium to Ensure Computational Reproducibility in High-Dimensional Classification Tasks Statistical Applications in Genetics and Molecular Biology. ,vol. 3, pp. 1- 24 ,(2004) , 10.2202/1544-6115.1078
Edna T Kimura, Marina N Nikiforova, Zhaowen Zhu, Jeffrey A Knauf, Yuri E Nikiforov, James A Fagin, None, High prevalence of BRAF mutations in thyroid cancer: genetic evidence for constitutive activation of the RET/PTC-RAS-BRAF signaling pathway in papillary thyroid carcinoma. Cancer Research. ,vol. 63, pp. 1454- 1457 ,(2003)
I. Bozic, T. Antal, H. Ohtsuki, H. Carter, D. Kim, S. Chen, R. Karchin, K. W. Kinzler, B. Vogelstein, M. A. Nowak, Accumulation of driver and passenger mutations during tumor progression Proceedings of the National Academy of Sciences of the United States of America. ,vol. 107, pp. 18545- 18550 ,(2010) , 10.1073/PNAS.1010978107
Todd Riley, Eduardo Sontag, Patricia Chen, Arnold Levine, Transcriptional control of human p53-regulated genes Nature Reviews Molecular Cell Biology. ,vol. 9, pp. 402- 412 ,(2008) , 10.1038/NRM2395
E D Williams, A Abrosimov, T Bogdanova, E P Demidchik, M Ito, V LiVolsi, E Lushnikov, J Rosai, Yu Sidorov, M D Tronko, A F Tsyb, S L Vowler, G A Thomas, Thyroid carcinoma after Chernobyl latent period, morphology and aggressiveness. British Journal of Cancer. ,vol. 90, pp. 2219- 2224 ,(2004) , 10.1038/SJ.BJC.6601860
Michael Reich, Ted Liefeld, Joshua Gould, Jim Lerner, Pablo Tamayo, Jill P Mesirov, GenePattern 2.0. Nature Genetics. ,vol. 38, pp. 500- 501 ,(2006) , 10.1038/NG0506-500
M.A. Hearst, S.T. Dumais, E. Osuna, J. Platt, B. Scholkopf, Support vector machines IEEE Intelligent Systems & Their Applications. ,vol. 13, pp. 18- 28 ,(1998) , 10.1109/5254.708428
Gillian C. Barnett, Catherine M. L. West, Alison M. Dunning, Rebecca M. Elliott, Charlotte E. Coles, Paul D. P. Pharoah, Neil G. Burnet, Normal tissue reactions to radiotherapy: towards tailoring treatment dose by genotype Nature Reviews Cancer. ,vol. 9, pp. 134- 142 ,(2009) , 10.1038/NRC2587
J. Malone, J. Unger, F. Delange, R. Lagasse, J. E. Dumont, Thyroid consequences of Chernobyl accident in the countries of the European Community. Journal of Endocrinological Investigation. ,vol. 14, pp. 701- 717 ,(1991) , 10.1007/BF03347899