Micro-object motion tracking based on the probability hypothesis density particle tracker

作者: Chunmei Shi , Lingling Zhao , Junjie Wang , Chiping Zhang , Xiaohong Su

DOI: 10.1007/S00285-015-0909-9

关键词:

摘要: Tracking micro-objects in the noisy microscopy image sequences is important for analysis of dynamic processes biological objects. In this paper, an automated tracking framework proposed to extract trajectories micro-objects. This uses a probability hypothesis density particle filtering (PF-PHD) tracker implement recursive state estimation and association. order increase efficiency approach, elliptical target model presented describe using shape parameters instead point-like targets which may cause inaccurate tracking. A novel likelihood function, not only covering spatiotemporal distance but also dealing with geometric function based on Mahalanobis norm, improve accuracy weight update process PF-PHD tracker. Using framework, larger number tracks are obtained. The experiments performed simulated data microtubule movements real mouse stem cells. We compare nearest neighbor method multiple method. Our can simultaneously track hundreds sequence.

参考文章(61)
Michael I. Miller, Donald L. Snyder, Random Point Processes in Time and Space ,(1991)
Thomas Bengtsson, Peter Bickel, Bo Li, Curse-of-dimensionality revisited: Collapse of the particle filter in very large scale systems arXiv: Statistics Theory. pp. 316- 334 ,(2008) , 10.1214/193940307000000518
Takeshi Nabeshima, Shingo Inoue, Kenta Okamoto, Guillermo Posadas-Herrera, Fuxun Yu, Leo Uchida, Akitoyo Ichinose, Miako Sakaguchi, Toshihiko Sunahara, Corazon C Buerano, Florencio P Tadena, Ildefonso B Orbita, Filipinas F Natividad, Kouichi Morita, None, Tanay virus, a new species of virus isolated from mosquitoes in the Philippines Journal of General Virology. ,vol. 95, pp. 1390- 1395 ,(2014) , 10.1099/VIR.0.061887-0
Trevor M. Wood, Christian A. Yates, David A. Wilkinson, Gabriel Rosser, Simplified Multitarget Tracking Using the PHD Filter for Microscopic Video Data IEEE Transactions on Circuits and Systems for Video Technology. ,vol. 22, pp. 702- 713 ,(2012) , 10.1109/TCSVT.2011.2177937
Yoshitaka Kimori, Mathematical morphology-based approach to the enhancement of morphological features in medical images. Journal of Clinical Bioinformatics. ,vol. 1, pp. 33- 33 ,(2011) , 10.1186/2043-9113-1-33
A.J. HAND, T. SUN, D.C. BARBER, D.R. HOSE, S. MACNEIL, Automated tracking of migrating cells in phase-contrast video microscopy sequences using image registration. Journal of Microscopy. ,vol. 234, pp. 62- 79 ,(2009) , 10.1111/J.1365-2818.2009.03144.X
B Ristic, D Clark, Ba-Ngu Vo, Improved SMC implementation of the PHD filter international conference on information fusion. pp. 1- 8 ,(2010) , 10.1109/ICIF.2010.5711922
Alper Yilmaz, Omar Javed, Mubarak Shah, Object tracking: A survey ACM Computing Surveys. ,vol. 38, pp. 13- ,(2006) , 10.1145/1177352.1177355
Sara Parrilli, Mariana Poderico, Cesario Vincenzo Angelino, Luisa Verdoliva, A Nonlocal SAR Image Denoising Algorithm Based on LLMMSE Wavelet Shrinkage IEEE Transactions on Geoscience and Remote Sensing. ,vol. 50, pp. 606- 616 ,(2012) , 10.1109/TGRS.2011.2161586
Fred Daum, Jim Huang, Particle degeneracy: root cause and solution Proceedings of SPIE. ,vol. 8050, ,(2011) , 10.1117/12.877167