Innovative metal oxide-based substrates for DNA microarrays

作者: Lidia Armelao , Michele Pascolini , Elena Biasiolo , Eugenio Tondello , Gregorio Bottaro

DOI: 10.1016/J.ICA.2008.03.121

关键词:

摘要: Abstract In the present report, we propose a novel approach to synthesize DNA microarrays that employs immobilization of nucleic acid molecules onto zinc and iron oxide surfaces through their phosphate backbone. Oxide films were prepared by sol–gel technique resulting characterized especially with respect surface chemistry morphological features both X-ray photoelectron spectroscopy (XPS) atomic force microscopy (AFM). ZnO annealed at T ⩽ 300 °C show most promising be employed for microarray preparation, i.e. high density binding sites (hydroxyl groups), smooth homogeneous surfaces, optical transmittance in visible spectral range suitable detection using fluorescence, easy handling during preparation procedures. The analysis retention on layers was performed scanning dye-labelled previously printed substrate robotic arm. Clearly spots regular shape revealed above background noise indicating anchoring treated is efficient does not interfere hybridization processes. use suitably engineered film makes strategy ideal facile, efficient, cost-effective manufacturing microarrays.

参考文章(38)
M Casarin, G Granozzi, E Tondello, A Vittadini, L Armelao, M Bettinelli, A theoretical and experimental investigation of the electronic structure of alpha -Fe2O3 thin films Journal of Physics: Condensed Matter. ,vol. 7, ,(1995) , 10.1088/0953-8984/7/23/004
J. B. Brzoska, I. Ben Azouz, F. Rondelez, Silanization of Solid Substrates: A Step Toward Reproducibility Langmuir. ,vol. 10, pp. 4367- 4373 ,(1994) , 10.1021/LA00023A072
M. Schena, D. Shalon, R. W. Davis, P. O. Brown, Quantitative Monitoring of Gene Expression Patterns with a Complementary DNA Microarray Science. ,vol. 270, pp. 467- 470 ,(1995) , 10.1126/SCIENCE.270.5235.467
Nathalie Zammatteo, Laurent Jeanmart, Sandrine Hamels, Stéphane Courtois, Pierre Louette, Laszlo Hevesi, José Remacle, Comparison between Different Strategies of Covalent Attachment of DNA to Glass Surfaces to Build DNA Microarrays Analytical Biochemistry. ,vol. 280, pp. 143- 150 ,(2000) , 10.1006/ABIO.2000.4515
Mary Manning, Gareth Redmond, Formation and characterization of DNA microarrays at silicon nitride substrates. Langmuir. ,vol. 21, pp. 395- 402 ,(2005) , 10.1021/LA0480033
D. E. Gray, S. C. Case-Green, T. S. Fell, P. J. Dobson, E. M. Southern, Ellipsometric and Interferometric Characterization of DNA Probes Immobilized on a Combinatorial Array Langmuir. ,vol. 13, pp. 2833- 2842 ,(1997) , 10.1021/LA962139M
Lidia Armelao, Gregorio Bottaro, Michele Pascolini, Michele Sessolo, Eugenio Tondello, Marco Bettinelli, Adolfo Speghini, Structure−Luminescence Correlations in Europium-Doped Sol−Gel ZnO Nanopowders Journal of Physical Chemistry C. ,vol. 112, pp. 4049- 4054 ,(2008) , 10.1021/JP710207R
Jagannath B. Lamture, Kenneth LBeattie, Barry E. Burke, Mitchell D. Eggers, Dan J. Ehrlich, Rick Fowler, Mark A. Hollis, Bernard B. Kosicki, Robert K. Reich, Sean R. Smith, Rajender S. Varma, Michael E. Hogan, Direct detection of nucleic acid hybridization on the surface of a charge coupled device Nucleic Acids Research. ,vol. 22, pp. 2121- 2125 ,(1994) , 10.1093/NAR/22.11.2121
Xiaolin Zhao, Raoul Kopelman, Mechanism of Organosilane Self-Assembled Monolayer Formation on Silica Studied by Second-Harmonic Generation The Journal of Physical Chemistry. ,vol. 100, pp. 11014- 11018 ,(1996) , 10.1021/JP9526657