Sampling Wild Species to Conserve Genetic Diversity

作者: Sean Hoban , Gayle Volk , Kanin J. Routson , Christina Walters , Chris Richards

DOI: 10.1007/978-3-319-95101-0_8

关键词:

摘要: Sampling seed from natural populations of crop wild relatives requires choice the locations and amount to sample. While this may seem like a simple choice, in fact careful planning collector’s sampling strategy is needed ensure that collection will contain high genetic variation, which turn for potential breeding or selection. Here we first describe different conservation targets intensities at collector might We then review research on appropriate number populations, plants, seeds collect, methodologies available helping make these decisions. suggest samplers reconsider long-standing minimum 50 samples per population, as be insufficient some cases. explain optimal samples, can determined with modeling approaches (niche modeling, survey, simulations) use knowledge species’ inherent traits (e.g., outcrossing rates) geographic distribution. Lastly, practical aspects sampling, including need return source population collect due change over time additional (sometimes 10 times much seed) account loss during storage use. also emphasize utility collecting abundant spatial environmental data well considering how used accompanying analyses, order ex situ collections useful many years come.

参考文章(94)
Federico Scossa, Yariv Brotman, Francisco de Abreu e Lima, Lothar Willmitzer, Zoran Nikoloski, Takayuki Tohge, Alisdair R. Fernie, Genomics-based strategies for the use of natural variation in the improvement of crop metabolism. Plant Science. ,vol. 242, pp. 47- 64 ,(2016) , 10.1016/J.PLANTSCI.2015.05.021
Peter H. Thrall, John G. Oakeshott, Gary Fitt, Simon Southerton, Jeremy J. Burdon, Andy Sheppard, Robyn J. Russell, Myron Zalucki, Mikko Heino, R. Ford Denison, Evolution in agriculture: the application of evolutionary approaches to the management of biotic interactions in agro-ecosystems. Evolutionary Applications. ,vol. 4, pp. 200- 215 ,(2011) , 10.1111/J.1752-4571.2010.00179.X
Gayle M. Volk, Dale R. Lockwood, Christopher M. Richards, Wild Plant Sampling Strategies: The Roles of Ecology and Evolution John Wiley & Sons, Inc.. pp. 285- 313 ,(2007) , 10.1002/9780470168035.CH5
Brenna R. Forester, Matthew R. Jones, Stéphane Joost, Erin L. Landguth, Jesse R. Lasky, Detecting spatial genetic signatures of local adaptation in heterogeneous landscapes Molecular Ecology. ,vol. 25, pp. 104- 120 ,(2016) , 10.1111/MEC.13476
Adrienne C Basey, Jeremie B Fant, Andrea T Kramer, Producing native plant materials for restoration: 10 rules to collect and maintain genetic diversity Native Plants Journal. ,vol. 16, pp. 37- 52 ,(2015) , 10.3368/NPJ.16.1.37
Thomas M. Bataillon, Thomas M. Bataillon, Daniel J. Schoen, Jacques L. David, Neutral Genetic Markers and Conservation Genetics: Simulated Germplasm Collections Genetics. ,vol. 144, pp. 409- 417 ,(1996) , 10.1093/GENETICS/144.1.409
SEAN M. HOBAN, DANIEL S. BORKOWSKI, SUNSHINE L. BROSI, TIM S. McCLEARY, LAURA M. THOMPSON, JASON S. McLACHLAN, MARIE A. PEREIRA, SCOTT E. SCHLARBAUM, JEANNE ROMERO-SEVERSON, Range-wide distribution of genetic diversity in the North American tree Juglans cinerea: a product of range shifts, not ecological marginality or recent population decline. Molecular Ecology. ,vol. 19, pp. 4876- 4891 ,(2010) , 10.1111/J.1365-294X.2010.04834.X
Jill T. Anderson, Plant fitness in a rapidly changing world. New Phytologist. ,vol. 210, pp. 81- 87 ,(2016) , 10.1111/NPH.13693
Susan R. McCouch, Kenneth L. McNally, Wen Wang, Ruaraidh Sackville Hamilton, Genomics of gene banks: A case study in rice American Journal of Botany. ,vol. 99, pp. 407- 423 ,(2012) , 10.3732/AJB.1100385