Localized and extended electronic eigenstates in proteins: A tight-binding approach

作者: Thorsten Koslowski

DOI: 10.1063/1.479161

关键词:

摘要: We present a numerical study of the electronic structure cytochrome subunit photoreaction center bacterium Rhodopseudomonas viridis. The is described by tight-binding Hamiltonian, resulting large secular matrix diagonalized applying sparse methods. In highly structured density states, localized chromophore eigenstates can be observed around HOMO-LUMO gap. low energy range, optical excitations originate from transitions between these states. Eigenfunctions that are extended on length scale up to ∼190 A found in bulk valence band Stretched along α-helices, conduction characterized cylindrical shape. discuss role states within electron transport and possible extensions model presented here.

参考文章(38)
Thorsten Koslowski, Walter Kob, Katharina Vollmayr, NUMERICAL STUDY OF THE ELECTRONIC STRUCTURE OF AMORPHOUS SILICA Physical Review B. ,vol. 56, pp. 9469- 9476 ,(1997) , 10.1103/PHYSREVB.56.9469
Massimo Marchi, Jürg Hutter, Michele Parrinello, A First Principles Investigation of the Structure of a Bacteriochlorophyll Crystal Journal of the American Chemical Society. ,vol. 118, pp. 7847- 7848 ,(1996) , 10.1021/JA953342R
Simone Knief, Wolfgang von Niessen, Thorsten Koslowski, Defects in a-Si and a-Si:H: A numerical study Physical Review B. ,vol. 58, pp. 4459- 4472 ,(1998) , 10.1103/PHYSREVB.58.4459
James M. Gruschus, Atsuo Kuki, New Hamiltonian model for long-range electronic superexchange in complex molecular structures The Journal of Physical Chemistry. ,vol. 97, pp. 5581- 5593 ,(1993) , 10.1021/J100123A021
Steven L. Dixon, Kenneth M. Merz, Semiempirical molecular orbital calculations with linear system size scaling Journal of Chemical Physics. ,vol. 104, pp. 6643- 6649 ,(1996) , 10.1063/1.471382
A. A. Stuchebrukhov, R. A. Marcus, Theoretical Study of Electron Transfer in Ferrocytochromes The Journal of Physical Chemistry. ,vol. 99, pp. 7581- 7590 ,(1995) , 10.1021/J100019A044
Vijay S. Pande, José Nelson Onuchic, Electron Transport in Disordered Polymeric and Biological Systems Physical Review Letters. ,vol. 78, pp. 146- 149 ,(1997) , 10.1103/PHYSREVLETT.78.146
J. M. Foster, S. F. Boys, Canonical Configurational Interaction Procedure Reviews of Modern Physics. ,vol. 32, pp. 300- 302 ,(1960) , 10.1103/REVMODPHYS.32.300