The Critical Role of RNA Processing and Degradation in the Control of Gene Expression

作者: Cecília M. Arraiano , José M. Andrade , Susana Domingues , Inês B. Guinote , Michal Malecki

DOI: 10.1111/J.1574-6976.2010.00242.X

关键词:

摘要: The continuous degradation and synthesis of prokaryotic mRNAs not only give rise to the metabolic changes that are required as cells grow divide but also rapid adaptation new environmental conditions. In bacteria, RNAs can be degraded by mechanisms act independently, in parallel, target different sites with efficiencies. accessibility for depends on several factors, including RNA higher-order structure, protection translating ribosomes polyadenylation status. Furthermore, have shown determinant post-transcriptional control gene expression. RNases mediate processing, decay quality RNA. divided into endonucleases cleave internally or exonucleases from one extremities. Just Escherichia coli there >20 RNases. RNase E is a single-strand-specific endonuclease critical mRNA E. coli. enzyme interacts exonuclease polynucleotide phosphorylase (PNPase), enolase helicase B (RhlB) form degradosome. However, Bacillus subtilis, this absent, it has other main such J1 III. III cleaves double-stranded family members involved interference eukaryotes. II ubiquitous exonucleases, eukaryotes, they catalytic subunit exosome. pathways execute maturation rRNAs tRNAs, intervene many small noncoding RNAs. general, global regulatory network extremely important regulation levels.

参考文章(480)
Audrey Stevens, Salil K. Niyogi, Hydrolysis of oligoribonucleotides by an enzyme fraction from Escherichia coli. Biochemical and Biophysical Research Communications. ,vol. 29, pp. 550- 555 ,(1967) , 10.1016/0006-291X(67)90520-7
J.C. Bardwell, P. Régnier, S.M. Chen, Y. Nakamura, M. Grunberg-Manago, D.L. Court, Autoregulation of RNase III operon by mRNA processing. The EMBO Journal. ,vol. 8, pp. 3401- 3407 ,(1989) , 10.1002/J.1460-2075.1989.TB08504.X
Cecília Maria Arraiano, Ana Barbas, Mónica Amblar, Characterizing ribonucleases in vitro examples of synergies between biochemical and structural analysis. Methods in Enzymology. ,vol. 447, pp. 131- 160 ,(2008) , 10.1016/S0076-6879(08)02208-8
David H. Bechhofer, Messenger RNA decay and maturation in Bacillus subtilis. Progress in Molecular Biology and Translational Science. ,vol. 85, pp. 231- 273 ,(2009) , 10.1016/S0079-6603(08)00806-4
Ambro van Hoof, Roy Parker, The exosome: a proteasome for RNA? Cell. ,vol. 99, pp. 347- 350 ,(1999) , 10.1016/S0092-8674(00)81520-2
Rajesh Pahwa, Steven Wilkinson Sf, Kelly Lyons, William C. Koller, Mechanism of Action Demos Medical Publishing. ,(2002)
Stéphanie Larose, Sherif Abou Elela, Bruno Lamontagne, Jim Boulanger, The RNase III family: a conserved structure and expanding functions in eukaryotic dsRNA metabolism. Current Issues in Molecular Biology. ,vol. 3, pp. 71- 78 ,(2001)
Amos B. Oppenheim, Daniel Kornitzer, Shoshy Altuvia, Donald L. Court, Posttranscriptional Control of the Lysogenic Pathway in Bacteriophage Lambda Progress in Nucleic Acid Research and Molecular Biology. ,vol. 46, pp. 37- 49 ,(1993) , 10.1016/S0079-6603(08)61017-X
Hachiro Inokuchi, Fumiaki Yamao, Structure and Expression of Prokaryotic tRNA Genes American Society of Microbiology. pp. 17- 30 ,(1995) , 10.1128/9781555818333.CH3