Establishment of Integrated Biobank for Precision Medicine and Personalized Healthcare: The Tohoku Medical Megabank Project.

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DOI: 10.31662/JMAJ.2019-0014

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摘要: The Tohoku Medical Megabank (TMM) project was established to provide creative reconstruction of the area that suffered from a huge earthquake and ensuing tsunami (the Great East Japan Earthquake, GEJE). TMM aims establish two large-scale genome cohorts an integrated biobank managing biospecimen related information. It supports community medicine by establishing next-generation medical systems through combination prospective cohort studies with total 150,000 participants genomic medicine. strategies for analyses in are develop elaborate reference panel means high-fidelity Japanese whole-genome sequence, design custom single nucleotide polymorphism (SNP) arrays based on panel, obtain genotype data all subsequently. Disease-associated information omics data, including metabolomics microbiome analysis, essential platform precision personalized healthcare (PHC). Ethical, legal, social issues (ELSI) education important implementing major considerations ELSI regarding each participant respect autonomy protection privacies. Moreover, developing human resources not only but also implementation PHC is required. We started pilot study return results familial hypercholesterolemia (FH) as target disease. solid platforms support environmental lifestyle factors individuals, which one most advanced care beyond evidenced-based near future.

参考文章(29)
Masao Nagasaki, Jun Yasuda, Fumiki Katsuoka, Naoki Nariai, Kaname Kojima, Yosuke Kawai, Yumi Yamaguchi-Kabata, Junji Yokozawa, Inaho Danjoh, Sakae Saito, Yukuto Sato, Takahiro Mimori, Kaoru Tsuda, Rumiko Saito, Xiaoqing Pan, Satoshi Nishikawa, Shin Ito, Yoko Kuroki, Osamu Tanabe, Nobuo Fuse, Shinichi Kuriyama, Hideyasu Kiyomoto, Atsushi Hozawa, Naoko Minegishi, James Douglas Engel, Kengo Kinoshita, Shigeo Kure, Nobuo Yaegashi, Masayuki Yamamoto, None, Rare variant discovery by deep whole-genome sequencing of 1,070 Japanese individuals Nature Communications. ,vol. 6, pp. 8018- 8018 ,(2015) , 10.1038/NCOMMS9018
Yosuke Kawai, Takahiro Mimori, Kaname Kojima, Naoki Nariai, Inaho Danjoh, Rumiko Saito, Jun Yasuda, Masayuki Yamamoto, Masao Nagasaki, Japonica array: improved genotype imputation by designing a population-specific SNP array with 1070 Japanese individuals Journal of Human Genetics. ,vol. 60, pp. 581- 587 ,(2015) , 10.1038/JHG.2015.68
Helen Pearson, Massive UK baby study cancelled Nature. ,vol. 526, pp. 620- 621 ,(2015) , 10.1038/526620A
Naomi R. Wray, Jian Yang, Ben J. Hayes, Alkes L. Price, Michael E. Goddard, Peter M. Visscher, Pitfalls of predicting complex traits from SNPs Nature Reviews Genetics. ,vol. 14, pp. 507- 515 ,(2013) , 10.1038/NRG3457
Teri A Manolio, Francis S Collins, Nancy J Cox, David B Goldstein, Lucia A Hindorff, David J Hunter, Mark I McCarthy, Erin M Ramos, Lon R Cardon, Aravinda Chakravarti, Judy H Cho, Alan E Guttmacher, Augustine Kong, Leonid Kruglyak, Elaine Mardis, Charles N Rotimi, Montgomery Slatkin, David Valle, Alice S Whittemore, Michael Boehnke, Andrew G Clark, Evan E Eichler, Greg Gibson, Jonathan L Haines, Trudy FC Mackay, Steven A McCarroll, Peter M Visscher, None, Finding the missing heritability of complex diseases. Nature. ,vol. 461, pp. 747- 753 ,(2009) , 10.1038/NATURE08494
Weiwei Zheng, Ze Zhang, Cuihua Liu, Yuanyuan Qiao, Dianrong Zhou, Jia Qu, Huaijie An, Ming Xiong, Zhiming Zhu, Xiaohang Zhao, Metagenomic sequencing reveals altered metabolic pathways in the oral microbiota of sailors during a long sea voyage Scientific Reports. ,vol. 5, pp. 9131- 9131 ,(2015) , 10.1038/SREP09131
Shaneen J. Leishman, Pauline J. Ford, Hong Lien Do, Janet E. Palmer, Nicholas C.K. Heng, Malcolm J. West, Gregory J. Seymour, Mary P. Cullinan, Periodontal pathogen load and increased antibody response to heat shock protein 60 in patients with cardiovascular disease. Journal of Clinical Periodontology. ,vol. 39, pp. 923- 930 ,(2012) , 10.1111/J.1600-051X.2012.01934.X
Nobuo Nishi, Eiichi Yoshimura, Kazuko Ishikawa-Takata, Nobuyo Tsuboyama-Kasaoka, Tetsuya Kubota, Motohiko Miyachi, Shinkan Tokudome, Yukari Yokoyama, Kiyomi Sakata, Seiichiro Kobayashi, Akira Ogawa, Relationship of Living Conditions With Dietary Patterns Among Survivors of the Great East Japan Earthquake Journal of Epidemiology. ,vol. 23, pp. 376- 381 ,(2013) , 10.2188/JEA.JE20130025
TIH Project, None, The International HapMap Project Nature. ,vol. 426, pp. 789- 796 ,(2003) , 10.1038/NATURE02168
Teri A. Manolio, Joan E. Bailey-Wilson, Francis S. Collins, Genes, environment and the value of prospective cohort studies Nature Reviews Genetics. ,vol. 7, pp. 812- 820 ,(2006) , 10.1038/NRG1919