Anammox Organisms: Enrichment, Cultivation, and Environmental Analysis
作者： Mike Jetten , Markus Schmid , Katinka van de Pas‐Schoonen , Jaap Sinninghe Damsté , Marc Strous
DOI: 10.1016/S0076-6879(05)97003-1
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摘要: Anaerobic ammonium oxidation (anammox) is the microbial of with nitrite to dinitrogen gas under strict anoxic conditions mediated by planctomycete-like bacteria. Anammox not only important in oceanic nitrogen cycle, but can also contribute substantially removal municipal and industrial wastewater treatment. This chapter addresses enrichment cultivation anammox bacteria a sequencing batch reactor (SBR) lift reactor. The reactors be operated anoxically as an or oxygen-limited "completely autotrophic over nitrite" (CANON) system. Pure cultures organisms have yet been obtained, cells purified more than 99.5% using Percoll density gradient centrifugation protocol. Furthermore, we show how communities natural man-made ecosystems identified characterized molecular methods such fluorescence situ hybridization (FISH) Planctomycetes/anammox-specific polymerase chain reaction (PCR). Both techniques are based on retrieved 16S rRNA gene sequences. In addition rRNA, unique ladderane lipids serve biomarkers determine abundance environmental samples.
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Marc Strous, J. Gijs Kuenen, John A. Fuerst, M. Wagner, Mike S.M. Jetten, The anammox case-a new experimental manifesto for microbiological eco-physiology. Antonie Van Leeuwenhoek International Journal of General and Molecular Microbiology. ,vol. 81, pp. 693- 702 ,(2002) , 10.1023/A:1020590413079
L K Poulsen, G Ballard, D A Stahl, Use of rRNA fluorescence in situ hybridization for measuring the activity of single cells in young and established biofilms. Applied and Environmental Microbiology. ,vol. 59, pp. 1354- 1360 ,(1993) , 10.1128/AEM.59.5.1354-1360.1993
Lawrence P. Wackett, Bacterial genome annotation tools Environmental Microbiology. ,vol. 7, pp. 450- 451 ,(2005) , 10.1111/J.1462-2920.2005.00794.X
U. van Dongen, M. S.M. Jetten, M. C.M. van Loosdrecht, The SHARON-Anammox process for treatment of ammonium rich wastewater Water Science and Technology. ,vol. 44, pp. 153- 160 ,(2001) , 10.2166/WST.2001.0037
Marc Strous, John A. Fuerst, Evelien H. M. Kramer, Susanne Logemann, Gerard Muyzer, Katinka T. van de Pas-Schoonen, Richard Webb, J. Gijs Kuenen, Mike S. M. Jetten, Missing lithotroph identified as new planctomycete Nature. ,vol. 400, pp. 446- 449 ,(1999) , 10.1038/22749
Alexander Loy, Matthias Horn, Michael Wagner, probeBase: an online resource for rRNA-targeted oligonucleotide probes Nucleic Acids Research. ,vol. 31, pp. 514- 516 ,(2003) , 10.1093/NAR/GKG016
Markus Schmid, Stephan Schmitz-Esser, Mike Jetten, Michael Wagner, 16S-23S rDNA intergenic spacer and 23S rDNA of anaerobic ammonium-oxidizing bacteria: implications for phylogeny and in situ detection. Environmental Microbiology. ,vol. 3, pp. 450- 459 ,(2001) , 10.1046/J.1462-2920.2001.00211.X
Laura A. Niftrik, John A. Fuerst, Jaap S.Sinninghe Damsté, J.Gijs Kuenen, Mike S.M. Jetten, Marc Strous, The anammoxosome: an intracytoplasmic compartment in anammox bacteria. Fems Microbiology Letters. ,vol. 233, pp. 7- 13 ,(2004) , 10.1016/J.FEMSLE.2004.01.044
Bess B Ward, Significance of anaerobic ammonium oxidation in the ocean Trends in Microbiology. ,vol. 11, pp. 408- 410 ,(2003) , 10.1016/S0966-842X(03)00181-1
Markus Schmid, Ulf Twachtmann, Michael Klein, Marc Strous, Stefan Juretschko, Mike Jetten, Jörg W. Metzger, Karl-Heinz Schleifer, Michael Wagner, Molecular evidence for genus level diversity of bacteria capable of catalyzing anaerobic ammonium oxidation. Systematic and Applied Microbiology. ,vol. 23, pp. 93- 106 ,(2000) , 10.1016/S0723-2020(00)80050-8