Bioinformatics analysis and experimental validation of TTK as a biomarker for prognosis in non-small cell lung cancer.

Mohamed Kabbout, Melinda M Garcia, Junya Fujimoto, Diane D Liu, Denise Woods, Chi-Wan Chow, Gabriela Mendoza, Amin A Momin, Brian P James, Luisa Solis, Carmen Behrens, J Jack Lee, Ignacio I Wistuba, Humam Kadara, None, ETS2 Mediated Tumor Suppressive Function and MET Oncogene Inhibition in Human Non–Small Cell Lung Cancer Clinical Cancer Research. ,vol. 19, pp. 3383- 3395 ,(2013) , 10.1158/1078-0432.CCR-13-0341

Mathias Uhlén, Linn Fagerberg, Björn M Hallström, Cecilia Lindskog, Per Oksvold, Adil Mardinoglu, Åsa Sivertsson, Caroline Kampf, Evelina Sjöstedt, Anna Asplund, IngMarie Olsson, Karolina Edlund, Emma Lundberg, Sanjay Navani, Cristina Al-Khalili Szigyarto, Jacob Odeberg, Dijana Djureinovic, Jenny Ottosson Takanen, Sophia Hober, Tove Alm, Per-Henrik Edqvist, Holger Berling, Hanna Tegel, Jan Mulder, Johan Rockberg, Peter Nilsson, Jochen M Schwenk, Marica Hamsten, Kalle Von Feilitzen, Mattias Forsberg, Lukas Persson, Fredric Johansson, Martin Zwahlen, Gunnar Von Heijne, Jens Nielsen, Fredrik Pontén, Tissue-based map of the human proteome Science. ,vol. 347, pp. 1260419- 1260419 ,(2015) , 10.1126/SCIENCE.1260419

Mark A. Feitelson, Alla Arzumanyan, Rob J. Kulathinal, Stacy W. Blain, Randall F. Holcombe, Jamal Mahajna, Maria Marino, Maria L. Martinez-Chantar, Roman Nawroth, Isidro Sanchez-Garcia, Dipali Sharma, Neeraj K. Saxena, Neetu Singh, Panagiotis J. Vlachostergios, Shanchun Guo, Kanya Honoki, Hiromasa Fujii, Alexandros G. Georgakilas, Alan Bilsland, Amedeo Amedei, Elena Niccolai, Amr Amin, S. Salman Ashraf, Chandra S. Boosani, Gunjan Guha, Maria Rosa Ciriolo, Katia Aquilano, Sophie Chen, Sulma I. Mohammed, Asfar S. Azmi, Dipita Bhakta, Dorota Halicka, W. Nicol Keith, Somaira Nowsheen, Sustained proliferation in cancer: Mechanisms and novel therapeutic targets Seminars in Cancer Biology. ,vol. 35, ,(2015) , 10.1016/J.SEMCANCER.2015.02.006

Gabrielle Marquardt, Nandita Mullapudi, Tao Wang, Weiguo Han, Miao Shi, Steven Keller, Changcheng Zhu, Joseph Locker, Simon D. Spivack, Juan Lin, Lung Cancer Transcriptomes Refined with Laser Capture Microdissection The American Journal of Pathology. ,vol. 184, pp. 2868- 2884 ,(2014) , 10.1016/J.AJPATH.2014.06.028

Jeanine L. Van Nostrand, Alice Brisac, Stephano S. Mello, Suzanne B.R. Jacobs, Richard Luong, Laura D. Attardi, The p53 Target Gene SIVA Enables Non–Small Cell Lung Cancer Development Cancer Discovery. ,vol. 5, pp. 622- 635 ,(2015) , 10.1158/2159-8290.CD-14-0921

Balázs Győrffy, Pawel Surowiak, Jan Budczies, András Lánczky, Online Survival Analysis Software to Assess the Prognostic Value of Biomarkers Using Transcriptomic Data in Non-Small-Cell Lung Cancer PLoS ONE. ,vol. 8, pp. e82241- ,(2013) , 10.1371/JOURNAL.PONE.0082241

Da Wei Huang, Brad T. Sherman, Richard A. Lempicki, Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists Nucleic Acids Research. ,vol. 37, pp. 1- 13 ,(2009) , 10.1093/NAR/GKN923

Humam Kadara, Junya Fujimoto, Suk-Young Yoo, Yuho Maki, Adam C. Gower, Mohamed Kabbout, Melinda M. Garcia, Chi-Wan Chow, Zuoming Chu, Gabriella Mendoza, Li Shen, Neda Kalhor, Waun Ki Hong, Cesar Moran, Jing Wang, Avrum Spira, Kevin R. Coombes, Ignacio I. Wistuba, Transcriptomic Architecture of the Adjacent Airway Field Cancerization in Non–Small Cell Lung Cancer Journal of the National Cancer Institute. ,vol. 106, ,(2014) , 10.1093/JNCI/DJU004

Da Wei Huang, Brad T Sherman, Richard A Lempicki, Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources. Nature Protocols. ,vol. 4, pp. 44- 57 ,(2009) , 10.1038/NPROT.2008.211

Youngtae Jeong, Ngoc T. Hoang, Alexander Lovejoy, Henning Stehr, Aaron M. Newman, Andrew J. Gentles, William Kong, Diana Truong, Shanique Martin, Aadel Chaudhuri, Diane Heiser, Li Zhou, Carmen Say, Justin N. Carter, Susan M. Hiniker, Billy W. Loo, Robert B. West, Philip Beachy, Ash A. Alizadeh, Maximilian Diehn, Role of KEAP1/NRF2 and TP53 Mutations in Lung Squamous Cell Carcinoma Development and Radiation Resistance Cancer Discovery. ,vol. 7, pp. 86- 101 ,(2017) , 10.1158/2159-8290.CD-16-0127