Cloning and Expression Analysis of Genes Encoding Lytic Endopeptidases L1 and L5 from Lysobacter sp. Strain XL1

作者: Y. S. Lapteva , O. E. Zolova , M. G. Shlyapnikov , I. M. Tsfasman , T. A. Muranova

DOI: 10.1128/AEM.01621-12

关键词:

摘要: Lytic enzymes are the group of hydrolases that break down structural polymers cell walls various microorganisms. In this work, we determined nucleotide sequences Lysobacter sp. strain XL1 alpA and alpB genes, which code for, respectively, secreted lytic endopeptidases L1 (AlpA) L5 (AlpB). silico analysis their amino acid showed these to be homologous proteins synthesized as precursors similar in organization: mature enzyme sequence is preceded by an N-terminal signal peptide a pro region. On basis phylogenetic analysis, AlpA AlpB were assigned S1E family [clan PA(S)] serine peptidases. Expression open reading frames (ORFs) Escherichia coli confirmed they for functionally active enzymes. Each ORF was predicted have Shine-Dalgarno located at canonical distance from start codon potential Rho-independent transcription terminator immediately after stop codon. The mRNAs experimentally found monocistronic; points both mRNAs. synthesis shown occur predominantly late logarithmic growth phase. amount mRNA cells much higher, correlates with greater production endopeptidase than L5.

参考文章(48)
E. A. Begunova, O. A. Stepnaya, V. Ya. Lysanskaya, I. S. Kulaev, Specificity of the action of lysoamidase on Staphylococcus aureus 209P cell walls. Biochemistry. ,vol. 68, pp. 735- 739 ,(2003) , 10.1023/A:1025074714910
Richard P. Novick, Roberta Brodsky, Studies on plasmid replication Journal of Molecular Biology. ,vol. 68, pp. 285- 302 ,(1972) , 10.1016/0022-2836(72)90214-8
J L Silen, D Frank, A Fujishige, R Bone, D A Agard, Analysis of prepro-alpha-lytic protease expression in Escherichia coli reveals that the pro region is required for activity. Journal of Bacteriology. ,vol. 171, pp. 1320- 1325 ,(1989) , 10.1128/JB.171.3.1320-1325.1989
Neil D. Rawlings, Alan J. Barrett, Families of serine peptidases. Methods in Enzymology. ,vol. 244, pp. 19- 61 ,(1994) , 10.1016/0076-6879(94)44004-2
Yves d'Aubenton Carafa, Edward Brody, Claude Thermes, Prediction of rho-independent Escherichia coli transcription terminators. A statistical analysis of their RNA stem-loop structures. Journal of Molecular Biology. ,vol. 216, pp. 835- 858 ,(1990) , 10.1016/S0022-2836(99)80005-9
Irina Matveevna Zfasman, Ljudmila Grigorevna Zubrizkaja, Olga Andreevna Stepnaja, Taisija Sergeevna Tchermenskaja, Igor Stepanovich Kulaev, Vassily Konstantinovich Akimenko, Larisa Aleksandrovna Ledova, Bacteriolytic complex, method for producing said complex and strain for carrying out said method ,(2001)
Hidekazu ARATANT, Shuji KAWATA, Shigeru TSURUYAMA, Norio YOSHIDA, Satoru MAKISUMI, Purification and characterization of an aminopeptidase from bovine leukocytes. Journal of Biochemistry. ,vol. 96, pp. 107- 115 ,(1984) , 10.1093/OXFORDJOURNALS.JBCHEM.A134802
T. A. Muranova, L. A. Krasovskaya, I. M. Tsfasman, O. A. Stepnaya, I. S. Kulaev, Structural investigations and identification of the extracellular bacteriolytic endopeptidase L1 from Lysobacter sp. XL1. Biochemistry. ,vol. 69, pp. 501- 505 ,(2004) , 10.1023/B:BIRY.0000029847.40511.26