Molecular approaches to determine the multiplicity of Plasmodium infections.

作者: Daibin Zhong , Cristian Koepfli , Liwang Cui , Guiyun Yan

DOI: 10.1186/S12936-018-2322-5

关键词:

摘要: Multiplicity of infection (MOI), also termed complexity (COI), is defined as the number genetically distinct parasite strains co-infecting a single host, which an important indicator malaria epidemiology. PCR-based genotyping often underestimates MOI. Next generation sequencing technologies provide much more accurate and genome-wide characterization polyclonal infections. However, complete haplotype multiclonal infections remains challenge due to PCR artifacts errors, requires efficient computational tools. In this review, advantages limitations current molecular approaches determine multiplicity are discussed.

参考文章(113)
Hypolite Muhindo Mavoko, Marion Kalabuanga, Christopher Delgado-Ratto, Vivi Maketa, Rodin Mukele, Blaise Fungula, Raquel Inocêncio da Luz, Anna Rosanas-Urgell, Pascal Lutumba, Jean-Pierre Van geertruyden, Uncomplicated Clinical Malaria Features, the Efficacy of Artesunate-Amodiaquine and Their Relation with Multiplicity of Infection in the Democratic Republic of Congo PLOS ONE. ,vol. 11, pp. e0157074- ,(2016) , 10.1371/JOURNAL.PONE.0157074
Saad M. Bin Dajem, Genetic diversity in the msp-1 and msp-2 alleles among Plasmodium falciparum field isolates from Jazan, Saudi Arabia. Journal of the Egyptian Society of Parasitology. ,vol. 45, pp. 199- 206 ,(2015) , 10.12816/0010866
Cu W, Zhang S, Yan J, Polymorphism of circumsporozoite protein and merozoite surface antigen of Plasmodium vivax Chinese Journal of Parasitology and Parasitic Diseases. ,vol. 16, pp. 138- ,(1998)
Maryam Mohadjerani, Zahra Amiri, Mohammad Javad Haghighatnia, Majid Tafrihi, Abasalt Hosseinzadeh-Colagar, MICROSATELLITE (SSR) AMPLIFICATION BY PCR USUALLY LED TO POLYMORPHIC BANDS: EVIDENCE WHICH SHOWS REPLICATION SLIPPAGE OCCURS IN EXTEND OR NASCENT DNA STRANDS Molecular Biology Research Communications. ,vol. 5, pp. 167- 174 ,(2016) , 10.22099/MBRC.2016.3789
Mandingha Kosso Etoka-Beka, Francine Ntoumi, Michael Kombo, Julia Deibert, Pierre Poulain, Christevy Vouvoungui, Simon Charles Kobawila, Felix Koukouikila-Koussounda, Plasmodium falciparuminfection in febrile Congolese children: prevalence of clinical malaria 10 years after introduction of artemisinin-combination therapies Tropical Medicine & International Health. ,vol. 21, pp. 1496- 1503 ,(2016) , 10.1111/TMI.12786
Camilla Messerli, Natalie E. Hofmann, Hans-Peter Beck, Ingrid Felger, Critical Evaluation of Molecular Monitoring in Malaria Drug Efficacy Trials and Pitfalls of Length-Polymorphic Markers Antimicrobial Agents and Chemotherapy. ,vol. 61, ,(2017) , 10.1128/AAC.01500-16
Abebe A. Fola, G. L. Abby Harrison, Mita Hapsari Hazairin, Céline Barnadas, Manuel W. Hetzel, Jonah Iga, Peter M. Siba, Ivo Mueller, Alyssa E. Barry, Higher Complexity of Infection and Genetic Diversity of Plasmodium vivax Than Plasmodium falciparum Across All Malaria Transmission Zones of Papua New Guinea. American Journal of Tropical Medicine and Hygiene. ,vol. 96, pp. 630- 641 ,(2017) , 10.4269/AJTMH.16-0716
Makhtar Niang, Laty G. Thiam, Cheikh Loucoubar, Abdourahmane Sow, Bacary D. Sadio, Mawlouth Diallo, Amadou A. Sall, Aissatou Toure-Balde, Spatio-temporal analysis of the genetic diversity and complexity of Plasmodium falciparum infections in Kedougou, southeastern Senegal. Parasites & Vectors. ,vol. 10, pp. 33- ,(2017) , 10.1186/S13071-017-1976-0
Brandt Levitt, Andrew Obala, Scott Langdon, David Corcoran, Wendy Prudhomme O’Meara, Steve M. Taylor, Overlap Extension Barcoding for the Next Generation Sequencing and Genotyping of Plasmodium falciparum in Individual Patients in Western Kenya Scientific Reports. ,vol. 7, pp. 41108- 41108 ,(2017) , 10.1038/SREP41108