Principal Component Analysis (PCA) for chemical data evaluation and heat maps preparation: A tutorial

作者: Dennis da Silva Ferreira , Edenir Rodrigues Pereira Filho , Leticia da Silva Rodrigues , Fabiola Manhas Verbi Pereira

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摘要: [en] This tutorial shows a step-by-step guide on handling big datasets using principal component analysis (PCA). A dataset of chemical elements' concentration, emission spectrum, and energy-dispersive X-ray fluorescence (EDXRF) of e-waste were used as examples. Five routines were proposed to apply data processing and PCA calculation focusing data from laser-induced breakdown spectroscopy (LIBS), EDXRF, and heat maps preparation. These routines can be used in various software such as MatLab, Octave, R, and Python. PCA was applied in three examples; the first was for concentrations, and the other two were for spectra. An example of heat maps assembling a hyperspectral image of a printed circuit was also described. In addition, a playlist was created on YouTube using the available examples. Therefore, with this tutorial, it may be possible to learn how to deal with a large volume of data by applying PCA. The authors hope to contribute to those researching in the area.(author)

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