引用次数
引用: 3,930
H-指数: 33
I10-指数 : 58
出版物: 140
Integrating genome and functional genomics data to reveal perturbed signaling pathways in ovarian cancers.
Songjian Lu , Xinghua Lu
AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science 2012 72 -78
6
2012
UIUC/MUSC at TREC 2005 Genomics Track
Azadeh Shakery , Atulya Velivelli , Xinghua Lu , Xuanhui Wang
text retrieval conference
8
2005
From genome to phenome: Predicting multiple cancer phenotypes based on somatic genomic alterations via the genomic impact transformer.
Xinghua Lu , William W. Cohen , Chunhui Cai , Yifeng Tao
arXiv: Molecular Networks
19
2019
Supervised Vector Quantized Variational Autoencoder for Learning Interpretable Global Representations.
Xinghua Lu , Michael Q. Ding , Yifan Xue
arXiv: Learning
1
2019
New Gene Embedding Learned from Biomedical Literature and Its Application in Identifying Cancer Drivers
Songjian Lu , Xinghua Lu , Lifan Liang
bioRxiv
2021
A signal-based method for finding driver modules of breast cancer metastasis to the lung
Gaibo Yan , Vicky Chen , Xinghua Lu , Songjian Lu
Scientific Reports 7 ( 1) 10023 -10023
3
2017
Conceptualization of molecular findings by mining gene annotations
Vicky Chen , Xinghua Lu
BMC Proceedings 7 ( 7) 1 -12
7
2013
Accurate discrimination of pancreatic ductal adenocarcinoma and chronic pancreatitis using multimarker expression data and samples obtained by minimally invasive fine needle aspiration.
Yian Chen , Bin Zheng , David H. Robbins , David N. Lewin
International Journal of Cancer 120 ( 7) 1511 -1517
53
2007
A novel method of using Deep Belief Networks and genetic perturbation data to search for yeast signaling pathways
Songjian Lu , Xiaonan Fan , Lujia Chen , Xinghua Lu
PLOS ONE 13 ( 9) e0203871
2
2018
eIF4E S209 phosphorylation licenses myc- and stress-driven oncogenesis.
Hang Ruan , Xiangyun Li , Xiang Xu , Brian J Leibowitz
eLife 9
12
2020
Abstract PR03: The tumor microenvironment (TME) in head and neck squamous cell carcinoma (HNSCC): Investigating new aspects of known cell types using single-cell RNA sequencing
Cornelius Kürten , Aditi Kulkarni , Xueer Chen , Lazar Vujanovic
Clinical Cancer Research 26
2020
Precision Oncology beyond Targeted Therapy: Combining Omics Data with Machine Learning Matches the Majority of Cancer Cells to Effective Therapeutics.
Michael Q. Ding , Lujia Chen , Gregory F. Cooper , Jonathan D. Young
Molecular Cancer Research 16 ( 2) 269 -278
119
2017
Pharmacologic Suppression of B7-H4 Glycosylation Restores Antitumor Immunity in Immune-Cold Breast Cancers.
Xinxin Song , Zhuan Zhou , Hongchun Li , Yifan Xue
Cancer Discovery 10 ( 12) 1872 -1893
9
2020
Modeling Signal Transduction from Protein Phosphorylation to Gene Expression
Chunhui Cai , Lujia Chen , Xia Jiang , Xinghua Lu
Cancer Informatics 13 59 -67
6
2014
Genome-wide methylomic and transcriptomic analyses identify subtype-specific epigenetic signatures commonly dysregulated in glioma stem cells and glioblastoma.
Rajendra P. Pangeni , Zhou Zhang , Angel A. Alvarez , Xuechao Wan
Epigenetics 13 ( 4) 432 -448
16
2018
Antisense Knock Out of the Inositol 1,3,4,5-Tetrakisphosphate Receptor GAP1IP4BP in the Human Erythroleukemia Cell Line Leads to the Appearance of Intermediate Conductance K(Ca) Channels that Hyperpolarize the Membrane and Enhance Calcium Influx
Xinghua Lu , Alan Fein , Maurice B. Feinstein , Flavia A. O'Rourke
The Journal of General Physiology 113 ( 1) 81 -96
23
1999
Tumor-specific Causal Inference (TCI): A Bayesian Method for Identifying Causative Genome Alterations within Individual Tumors
Gregory Cooper , Chunhui Cai , Xinghua Lu
bioRxiv 225631
7
2017
Distinct roles for de novo versus hydrolytic pathways of sphingolipid biosynthesis in Saccharomyces cerevisiae.
L. Ashley Cowart , Yasuo Okamoto , Xinghua Lu , Yusuf A. Hannun
Biochemical Journal 393 ( 3) 733 -740
40
2006
Novel metrics for evaluating the functional coherence of protein groups via protein semantic network
Bin Zheng , Xinghua Lu
Genome Biology 8 ( 7) 1 -13
13
2007
An exact algorithm for finding cancer driver somatic genome alterations: the weighted mutually exclusive maximum set cover problem
Songjian Lu , Gunasheil Mandava , Gaibo Yan , Xinghua Lu
Algorithms for Molecular Biology 11 ( 1) 11 -11
3
2016