Annotation of the Arabidopsis Genome

Jennifer R. Wortman , Brian J. Haas , Linda I. Hannick , Roger K. Smith
Plant Physiology 132 ( 2) 461 -468

141
2003
Evolution of invasion in a diverse set of Fusobacterium species.

Abigail Manson McGuire , Kyla Cochrane , Allison D. Griggs , Brian J. Haas
Mbio 5 ( 6)

52
2014
Comparative Genomics of Recent Shiga Toxin-Producing Escherichia coli O104:H4: Short-Term Evolution of an Emerging Pathogen

Yonatan H. Grad , Paul Godfrey , Gustavo C. Cerquiera , Patricia Mariani-Kurkdjian
Mbio 4 ( 1)

62
2013
Genome level analysis of rice mRNA 3′-end processing signals and alternative polyadenylation

Yingjia Shen , Guoli Ji , Brian J. Haas , Xiaohui Wu
Nucleic Acids Research 36 ( 9) 3150 -3161

133
2008
The genome of the blood fluke Schistosoma mansoni

Matthew Berriman , Brian J. Haas , Philip T. LoVerde , R. Alan Wilson
Nature 460 ( 7253) 352 -358

1,159
2009
Branch Point Identification and Sequence Requirements for Intron Splicing in Plasmodium falciparum

Xiaohong Zhang , Caitlin A. Tolzmann , Martin Melcher , Brian J. Haas
Eukaryotic Cell 10 ( 11) 1422 -1428

17
2011
Advances in Decoding Axolotl Limb Regeneration.

Brian J. Haas , Jessica L. Whited
Trends in Genetics 33 ( 8) 553 -565

85
2017
Accuracy assessment of fusion transcript detection via read-mapping and de novo fusion transcript assembly-based methods

Brian J. Haas , Alexander Dobin , Bo Li , Nicolas Stransky
Genome Biology 20 ( 1) 1 -16

100
2019
STAR-Fusion: Fast and Accurate Fusion Transcript Detection from RNA-Seq

Brian J. Haas , Alex Dobin , Nicolas Stransky , Bo Li
bioRxiv 120295

104
2017
Kinannote, a computer program to identify and classify members of the eukaryotic protein kinase superfamily

Jonathan M. Goldberg , Allison D. Griggs , Janet L. Smith , Brian J. Haas
Bioinformatics 29 ( 19) 2387 -2394

35
2013
UCHIME improves sensitivity and speed of chimera detection

Robert C. Edgar , Brian J. Haas , Jose C. Clemente , Christopher Quince
Bioinformatics 27 ( 16) 2194 -2200

12,614
2011
Draft genome sequence of the sexually transmitted pathogen Trichomonas vaginalis

Jane M. Carlton , Robert P. Hirt , Joana C. Silva , Arthur L. Delcher
Science 315 ( 5809) 207 -212

940
2007
Identification of Pax5 as a Target of MTA1 in B-Cell Lymphomas

Seetharaman Balasenthil , Anupama E. Gururaj , Amjad H. Talukder , Rozita Bagheri-Yarmand
Cancer Research 67 ( 15) 7132 -7138

56
2007
Cross-Talk of Expression Quantitative Trait Loci Within 2 Interacting Blood Pressure Quantitative Trait Loci

Norman H. Lee , Brian J. Haas , Noah E. Letwin , Bryan C. Frank
Hypertension 50 ( 6) 1126 -1133

12
2007
30
2017
Distinctive Expansion of Potential Virulence Genes in the Genome of the Oomycete Fish Pathogen Saprolegnia parasitica

Rays H. Y. Jiang , Irene de Bruijn , Brian J. Haas , Rodrigo Belmonte
PLoS Genetics 9 ( 6) e1003272

181
2013
7
2020
Compilation of mRNA polyadenylation signals in Arabidopsis revealed a new signal element and potential secondary structures.

Johnny C. Loke , Eric A. Stahlberg , David G. Strenski , Brian J. Haas
Plant Physiology 138 ( 3) 1457 -1468

169
2005
Analysis of the cDNAs of Hypothetical Genes on Arabidopsis Chromosome 2 Reveals Numerous Transcript Variants

Yong-Li Xiao , Shannon R. Smith , Nadeeza Ishmael , Julia C. Redman
Plant Physiology 139 ( 3) 1323 -1337

50
2005