Rapid in vitro prototyping of O-methyltransferases for pathway applications in Escherichia coli.

Thomas Hackl , Kristina Haslinger , Kristina Haslinger , Kristala L.J. Prather
Chemistry & Biology

2021
AliTV—interactive visualization of whole genome comparisons

Markus J. Ankenbrand , Sonja Hohlfeld , Thomas Hackl , Frank Förster
PeerJ 3

58
2017
Single cell genomes of Prochlorococcus, Synechococcus, and sympatric microbes from diverse marine environments.

Paul M. Berube , Steven J. Biller , Thomas Hackl , Shane L. Hogle
Scientific Data 5 ( 1) 180154

42
2018
Marine microbial metagenomes sampled across space and time

Steven J. Biller , Paul M. Berube , Keven Dooley , Madeline Williams
Scientific Data 5 ( 1) 180176

59
2018
Host genome integration and giant virus-induced reactivation of the virophage mavirus

Matthias G. Fischer , Thomas Hackl
Nature 540 ( 7632) 288 -291

64
2016
proovread : large-scale high-accuracy PacBio correction through iterative short read consensus

Thomas Hackl , Rainer Hedrich , Jörg Schultz , Frank Förster
Bioinformatics 30 ( 21) 3004 -3011

451
2014
The ITS2 Database.

Benjamin Merget , Christian Koetschan , Thomas Hackl , Frank Förster
Journal of Visualized Experiments ( 61)

37
2012
Metagenomic binning of a marine sponge microbiome reveals unity in defense but metabolic specialization.

Beate M Slaby , Thomas Hackl , Hannes Horn , Kristina Bayer
The ISME Journal 11 ( 11) 2465 -2478

142
2017
Genomes of the Venus Flytrap and Close Relatives Unveil the Roots of Plant Carnivory

Gergo Palfalvi , Thomas Hackl , Niklas Terhoeven , Tomoko F. Shibata
Current Biology 30 ( 12)

15
2020
Visualization of giant virus particles using BONCAT labeling and STED microscopy

Mónica Berjón-Otero , Sarah Duponchel , Thomas Hackl , Matthias Fischer
bioRxiv 1 -22

2020
Novel integrative elements and genomic plasticity in ocean ecosystems

Thomas Hackl , Raphaël Laurenceau , Markus J Ankenbrand , Christina Bliem
bioRxiv 1 -18

20
2020
ITS2 Database IV: Interactive taxon sampling for internal transcribed spacer 2 based phylogenies

Christian Koetschan , Thomas Hackl , Tobias Müller , Matthias Wolf
Molecular Phylogenetics and Evolution 63 ( 3) 585 -588

153
2012
reper: Genome-wide identification, classification and quantification of repetitive elements without an assembled genome

Niklas Terhoeven , Jörg Schultz , Thomas Hackl
The Journal of Open Source Software 3 ( 22) 527

1
2018
chloroExtractor: extraction and assembly of the chloroplast genome from whole genome shotgun data

Markus J Ankenbrand , Simon Pfaff , Niklas Terhoeven , Musga Qureischi
The Journal of Open Source Software 3 ( 21) 464

13
2018
Phosphonate production by marine microbes: exploring new sources and potential function

Marianne Acker , Shane L Hogle , Paul M Berube , Thomas Hackl
bioRxiv

17
2020
Improving draft genome contiguity with reference-derived in silico mate-pair libraries.

José Horacio Grau , Thomas Hackl , Klaus-Peter Koepfli , Michael Hofreiter
GigaScience 7 ( 5)

10
2018
Four high-quality draft genome assemblies of the marine heterotrophic nanoflagellate Cafeteria roenbergensis.

Thomas Hackl , Roman Martin , Karina Barenhoff , Sarah Duponchel
Scientific Data 7 ( 1) 29

7
2020
Siderophores as an iron source for picocyanobacteria in deep chlorophyll maximum layers of the oligotrophic ocean

Shane L Hogle , Thomas Hackl , Randelle M Bundy , Jiwoon Park
The ISME Journal 16 ( 6) 1636 -1646

7
2022
Updated virophage taxonomy and distinction from Polinton-like viruses

Simon Roux , Matthias G Fischer , Thomas Hackl , Laura A Katz
Biomolecules 13 ( 2) 204

2023