Inferring phylogenies: an instant classic

A J Drummond
Heredity 93 ( 5) 519 -519

2004
Inference of viral evolutionary rates from molecular sequences.

A DRUMMON , OLIVERGPYBUS , A RAMBAUT
Advances in Parasitology 54 331 -358

151
2003
Evolutionary History of Cotranscriptional Editing in the Paramyxoviral Phosphoprotein Gene

Richard L Kingston , Alexei J Drummond , Jordan Douglas
Virus Evolution

2021
Use of Genomics to Track Coronavirus Disease Outbreaks, New Zealand.

Olin K Silander , Jemma L Geoghegan , Nikki E Freed , Joep de Ligt
Emerging Infectious Diseases 27 ( 5) 1317 -1322

2
2021
Relaxed Phylogenetics and Dating with Confidence

Alexei J Drummond , Simon Y. W Ho , Matthew J Phillips , Andrew Rambaut
PLOS Biology 4 ( 5) 699 -710

6,204
2006
BEAST: Bayesian evolutionary analysis by sampling trees

Andrew D Morgan , Michael A Brockhurst , Laura DC Lopez-Pascua , Csaba Pal
BMC Evolutionary Biology 7 ( 1) 214 -214

13,084
2007
Bayesian inference of population size history from multiple loci

Joseph Heled , Alexei J Drummond
BMC Evolutionary Biology 8 ( 1) 289 -289

563
2008
Simulating gene trees under the multispecies coalescent and time-dependent migration.

Joseph Heled , David Bryant , Alexei J Drummond
BMC Evolutionary Biology 13 ( 1) 44 -44

42
2013
Population genetic estimation of the loss of genetic diversity during horizontal transmission of HIV-1

Charles TT Edwards , Edward C Holmes , Daniel J Wilson , Raphael P Viscidi
BMC Evolutionary Biology 6 ( 1) 28 -28

68
2006
Posterior Summarization in Bayesian Phylogenetics Using Tracer 1.7.

Andrew Rambaut , Alexei J Drummond , Dong Xie , Guy Baele
Systematic Biology 67 ( 5) 901 -904

5,689
2018
Phylodynamic Model Adequacy Using Posterior Predictive Simulations.

Sebastian Duchene , Remco Bouckaert , David A Duchene , Tanja Stadler
Systematic Biology 68 ( 2) 358 -364

16
2019
Bayesian Inference of Species Networks from Multilocus Sequence Data.

Chi Zhang , Huw A Ogilvie , Alexei J Drummond , Tanja Stadler
Molecular Biology and Evolution 35 ( 2) 504 -517

85
2018
Recursive algorithms for phylogenetic tree counting

Alexandra Gavryushkina , David Welch , Alexei J Drummond
Algorithms for Molecular Biology 8 ( 1) 26 -26

12
2013
Bayesian random local clocks, or one rate to rule them all

Alexei J Drummond , Marc A Suchard
BMC Biology 8 ( 1) 114 -114

440
2010
bModelTest: Bayesian phylogenetic site model averaging and model comparison

Remco R Bouckaert , Alexei J Drummond
bioRxiv 020792

598
2016
Neotenous origins for pelagic octopuses

Jan Strugnell , Mark Norman , Alexei J Drummond , Alan Cooper
Current Biology 14 ( 8)

30
2004
SANTA-SIM: simulating viral sequence evolution dynamics under selection and recombination.

Abbas Jariani , Christopher Warth , Koen Deforche , Pieter Libin
Virus Evolution 5 ( 1)

11
2019
Bayesian phylogenetic and phylodynamic data integration using BEAST 1.10

Marc A Suchard , Philippe Lemey , Guy Baele , Daniel L Ayres
Virus Evolution 4 ( 1)

2,081
2018
Tree measures and the number of segregating sites in time-structured population samples

Roald Forsberg , Alexei J Drummond , Jotun Hein
BMC Genetics 6 ( 1) 35 -35

4
2005