引用次数
引用: 13,270
H-指数: 52
I10-指数 : 84
出版物: 162
Microbial community dynamics revisited
Boyang Ji , Markus J Herrgård , Jens Nielsen
Nature Computational Science 1 ( 10) 640 -641
2
2021
The YNP Metagenome Project: Environmental Parameters Responsible for Microbial Distribution in the Yellowstone Geothermal Ecosystem
William P Inskeep , Zackary J Jay , Susannah G Tringe , Markus J Herrgård
Frontiers in Microbiology 4 67 -67
115
2013
Building an Alliance of Global Biofoundries
Paul S Freemont , Nicola J Patron , Jose A Carrasco , Markus J Herrgård
Nature Communications 10 2040 -2040
1
2019
Oral supplementation of nicotinamide riboside alters intestinal microbial composition in rats and mice, but not humans
A Augusto Peluso , Agnete T Lundgaard , Parizad Babaei , Felippe Mousovich-Neto
npj Aging 9 ( 1) 7 -7
7
2023
Reconstruction and Validation of Saccharomyces cerevisiae iND750, a Fully Compartmentalized Genome-Scale Metabolic Model
Natalie C Duarte , Markus J Herrgård , Bernhard Ø Palsson ,
Genome Research 14 ( 7) 1298 -1309
611
2004
Integrated analysis of regulatory and metabolic networks reveals novel regulatory mechanisms in Saccharomyces cerevisiae.
Markus J Herrgård , Baek-Seok Lee , Vasiliy Portnoy , Bernhard Ø Palsson
Genome Research 16 ( 5) 627 -635
196
2006
Reconciling gene expression data with known genome-scale regulatory network structures.
Markus J Herrgård , Markus W Covert
Genome Research 13 ( 11) 2423 -2434
161
2003
Analysis of genetic variation and potential applications in genome-scale metabolic modeling
João GR Cardoso , Mikael Rørdam Andersen , Markus J Herrgård , Nikolaus Sonnenschein
Frontiers in Bioengineering and Biotechnology 3 ( 13) 13 -13
18
2015
Multi-Omics Analysis of Fatty Alcohol Production in Engineered Yeasts Saccharomyces cerevisiae and Yarrowia lipolytica
Jonathan Dahlin , Carina Holkenbrink , Eko Roy Marella , Guokun Wang
Frontiers in Genetics 10 747
16
2019
Membrane transporter identification and modulation via adaptive laboratory evolution
Mohammad S Radi , Jesus E SalcedoSora , Se Hyeuk Kim , Suresh Sudarsan
Metabolic Engineering 72 376 -390
22
2022
Laboratory evolution reveals general and specific tolerance mechanisms for commodity chemicals
Rebecca M Lennen , Hyun Gyu Lim , Kristian Jensen , Elsayed T Mohammed
Metabolic Engineering 76 179 -192
20
2023
A dual-reporter system for investigating and optimizing protein translation and folding in E. coli
Ariane Zutz , Louise Hamborg , Lasse Ebdrup Pedersen , Maher M Kassem
Nature Communications 12 ( 1) 6093 -6093
20
2021
Identification and engineering of transporters for efficient melatonin production in Escherichia coli
Lei Yang , Sailesh Malla , Emre Özdemir , Se Hyeuk Kim
Frontiers in Microbiology 13 880847 -880847
8
2022
Computational methods to assess the production potential of bio-based chemicals
Miguel A Campodonico , Sumesh Sukumara , Adam M Feist , Markus J Herrgård
Synthetic Metabolic Pathways: Methods and Protocols 97 -116
8
2018
Current challenges in modeling cellular metabolism
Daniel Machado , Kai H Zhuang , Nikolaus Sonnenschein , Markus J Herrgård
Frontiers in Bioengineering and Biotechnology 3 193 -193
8
2015
Enhancing metabolic models with genome-scale experimental data
Kristian Jensen , Steinn Gudmundsson , Markus J Herrgård
Systems biology 337 -350
7
2018
Leveraging high-resolution omics data for predicting responses and adverse events to immune checkpoint inhibitors
Angelo Limeta , Francesco Gatto , Markus J Herrgård , Boyang Ji
Computational and Structural Biotechnology Journal
3
2023
An automated workflow for multi-omics screening of microbial model organisms
Stefano Donati , Matthias Mattanovich , Pernille Hjort , Simo Abdessamad Baallal Jacobsen
npj Systems Biology and Applications 9 ( 1) 14 -14
3
2023
Corrigendum: Multi-Omics Analysis of Fatty Alcohol Production in Engineered Yeasts Saccharomyces Cerevisiae and Yarrowia Lipolytica
Jonathan Dahlin , Carina Holkenbrink , Eko Roy Marella , Guokun Wang
Frontiers in Genetics 11 637738 -637738
1
2021
Genome-scale models of metabolic and regulatory networks
Markus J Herrgård , Bernhard Ø Palsson
Systems Biology: Volume II: Networks, Models, and Applications 2 232 -232
1
2006
Adam Feist Rebecca M Lennen Nikolaus Sonnenschein Markus Covert Daniel Machado Jens Nielsen Morten O A Sommer Irina Borodina William P. Inskeep Douglas B Rusch Zackary J Jay Konstantin Schneider Lasse Ebdrup Pedersen Susannah Tringe Christian Lieven Jay Keasling Michael Krogh Jensen Eytan Ruppin Tomer Shlomi Ólafur Ögmundarson