Phylogeographic differentiation versus transcriptomic adaptation to warm temperatures in Zostera marina, a globally important seagrass

A. Jueterbock , S. U. Franssen , N. Bergmann , J. Gu
Molecular Ecology 25 ( 21) 5396 -5411

52
2016
Transcriptomic resilience to global warming in the seagrass Zostera marina, a marine foundation species

S. U. Franssen , J. Gu , N. Bergmann , G. Winters
Proceedings of the National Academy of Sciences of the United States of America 108 ( 48) 19276 -19281

167
2011
Identifying core features of adaptive metabolic mechanisms for chronic heat stress attenuation contributing to systems robustness

Jenny Gu , Katrin Weber , Elisabeth Klemp , Gidon Winters
Integrative Biology 4 ( 5) 480 -493

36
2012
Genomic analysis of natural intra-specific hybrids among Ethiopian isolates of Leishmania donovani.

James A. Cotton , Caroline Durrant , Susanne U. Franssen , Tesfaye Gelanew
PLOS Neglected Tropical Diseases 14 ( 4)

5
2020
Massive habitat-specific genomic response in D. melanogaster populations during experimental evolution in hot and cold environments

Ray Tobler , Susanne U. Franssen , Robert Kofler , Pablo Orozco-terWengel
Molecular Biology and Evolution 31 ( 2) 364 -375

139
2014
Patterns of Linkage Disequilibrium and Long Range Hitchhiking in Evolving Experimental Drosophila melanogaster Populations

Susanne U. Franssen , Viola Nolte , Ray Tobler , Christian Schlötterer
Molecular Biology and Evolution 32 ( 2) 495 -509

61
2015
Global genome diversity of the Leishmania donovani complex

Susanne U. Franssen , Caroline Durrant , Olivia Stark , Bettina Moser
bioRxiv 710145

1
2019
Allelic imbalance metre (Allim), a new tool for measuring allele-specific gene expression with RNA-seq data.

Ram Vinay Pandey , Susanne U. Franssen , Andreas Futschik , Christian Schlötterer
Molecular Ecology Resources 13 ( 4) 740 -745

28
2013
High rates of phasing errors in highly polymorphic species with low levels of linkage disequilibrium

Marek Bukowicki , Susanne U. Franssen , Christian Schlötterer
Molecular Ecology Resources 16 ( 4) 874 -882

12
2016
Intra-Specific Regulatory Variation in Drosophila pseudoobscura

Anton Suvorov , Viola Nolte , Ram Vinay Pandey , Susanne U. Franssen
PLoS ONE 8 ( 12) e83547

23
2013
A Way Straight-Forward for Leishmania Genetics.

James A. Cotton , Susanne U. Franssen
Trends in Parasitology 36 ( 9) 719 -721

2020
69
2014
Comprehensive transcriptome analysis of the highly complex Pisum sativum genome using next generation sequencing

Susanne U Franssen , Roshan P Shrestha , Andrea Bräutigam , Erich Bornberg-Bauer
BMC Genomics 12 ( 1) 227 -227

194
2011
Global genome diversity of the Leishmania donovani complex.

Susanne U Franssen , Caroline Durrant , Olivia Stark , Bettina Moser
eLife 9

19
2020
Geographic origin and vertical transmission of Leishmania infantum parasites in hunting hounds, United States

Susanne U Franssen , Mandy J Sanders , Matt Berriman , Christine A Petersen
Emerging infectious diseases 28 ( 6) 1211

1
2022
Diversity and within-host evolution of Leishmania donovani from visceral leishmaniasis patients with and without HIV coinfection in northern Ethiopia

Susanne U Franssen , Yegnasew Takele , Emebet Adem , Mandy J Sanders
MBio 12 ( 3) 10.1128/mbio. 00971 -21

7
2021
3
2022
Diversity and within-host evolution of parasites from VL and VL/HIV patients in Northern Ethiopia

Susanne U Franssen , Yegnasew Takele , Emebet Adem , Mandy J Sanders
medRxiv 2021.04. 01.21254750 -2021.04. 01.21254750

1
2021
Parasite genetic variation and systemic immune responses are not associated with different clinical presentations of cutaneous leishmaniasis caused by Leishmania aethiopica

Endalew Yizengaw , Yegnasew Takele , Susanne U Franssen , Bizuayehu Gashaw
bioRxiv 2024.04. 19.590259 -2024.04. 19.590259

2024